Thamnophis sirtalis (common garter snake): 106537715
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Entry
106537715 CDS
T06107
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03250
Viral life cycle - HIV-1
tsr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106537715 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106537715 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106537715 (SAMHD1)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106537715 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
Npa1
Motif
Other DBs
NCBI-GeneID:
106537715
NCBI-ProteinID:
XP_013907385
UniProt:
A0A6I9XRN5
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All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSNGSREGALKRAWPTSSADGFQTPQKRGVAAADSIGSISLHPRSWDTEQLCAFLQAQGL
EAEELQRFREHEITGETVPSLTESHLEKMGICTVGVREKLLICLRKLAQSQSYTEIAKVF
NDPIHGHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGGSHNRFEHSLGVSHLAGRL
VQALQERQPELNIDQRDILCVQIAGLCHDLGHGPFSHMFDARFIPLARPGLKWKHELASV
QMFEYLIDSNNLKPDMEKYGLQLDEDIDFIKEQIASPVEEKMGDKEWPYCGRSKNKSFLY
EIVANKTSGIDVDKWDYFARDCHHLGIQNNFDYERFIKFARVCQVKDMMHICTRDKEVGN
LYDMFHTRNCLHRRAYQHKVSNIIETMITDAFLKADPYIKIKGSGGKMFRISTALEDMEA
YTKLTDEIFLKILHSDEPELSDAREILCKIQQRDLFKCLGETQPPEGKEIKKEDYDGLRA
EIVNSKPKTISVDVELKAEDFIVDVIDMDYGMKKRNPINSVRFYCKTDITQAVKITREQV
SQLLPEKFAEQIIRVYCKKKDAKIIEAATKYFIQWCMDKDFTKPRDGDVVAPELTPMKKG
WNKDDENQDSNRNSSCKVKLF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcagccgggaaggcgcccttaaacgggcctggcccaccagctcggccgat
ggcttccagacgcctcaaaagcgcggcgttgccgctgcggactcgattggttccattagc
ctccatcctcgatcctgggacacggagcagctgtgcgccttccttcaggcgcagggcttg
gaagctgaggagctgcagcgctttcgagaacatgaaataactggtgaaactgtcccatct
ctcactgaatctcatcttgaaaaaatgggaatttgtactgtaggagtgagagagaaactg
ctaatttgtctgcgcaaactggcacaaagtcagagttacactgaaatagcaaaggttttt
aatgatccaatccatggtcatattgaaatgcatcctcttcttgttcgcatcattgacaca
cctcaatttcagcgtctacgatatattaaacaattgggtggcacttactatgttttccca
ggaggatcacacaatcgctttgaacattctcttggcgttagtcatctcgcaggccgtttg
gtgcaggcgttgcaagaacgacaacctgaactgaatattgatcagagggatattctctgt
gttcaaattgctggactttgtcatgacttgggtcatggaccattttcacatatgtttgat
gcaagattcattccacttgctcgcccgggattaaaatggaagcatgagctggcttcagtt
cagatgtttgaatacttaattgattccaataacttaaagccagacatggaaaagtatggt
ctccagcttgatgaagacatagattttatcaaagaacagatagcaagtcctgttgaggag
aaaatgggagacaaagagtggccctattgtggtcgttccaaaaacaagagttttctttac
gaaatagtggctaacaaaacaagtggcattgatgttgataaatgggactattttgccagg
gattgtcatcatcttggaattcaaaacaattttgattatgagcgcttcattaaatttgct
cgagtgtgccaagtgaaagatatgatgcatatttgtacccgcgacaaggaggttggaaat
ttgtatgacatgttccacacacgaaactgtctgcaccgcagagcatatcagcacaaagtt
agcaacattattgaaaccatgattactgatgcctttctaaaggctgatccatatatcaaa
ataaagggctcaggtggaaaaatgttccggatctctacagcactggaagacatggaagcc
tataccaagctgacagatgaaatctttttgaagattctacattctgatgaaccagagctg
agtgatgcacgcgaaattctgtgtaaaatacagcagcgcgatctctttaaatgcttggga
gaaacacagccaccagagggcaaggaaattaaaaaggaagattatgatggattgcgagct
gaaattgttaattccaaacctaagacaatctctgtagatgtggagctgaaggctgaagat
tttattgttgatgttattgatatggattatggaatgaaaaaaaggaaccctatcaatagt
gttcgcttttactgcaagactgacatcactcaggcagttaaaattacaagagaacaagtt
tcacagctgctcccagaaaaatttgcagagcagatcatcagagtttattgtaaaaaaaag
gatgcaaagataattgaggctgctacaaaatactttattcagtggtgtatggataaggat
ttcactaaaccacgggatggtgatgtggttgctccagaacttactccaatgaaaaaaggg
tggaataaggatgatgaaaatcaggattcaaacaggaacagtagttgtaaagtaaaactt
ttttaa
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