Thamnophis sirtalis (common garter snake): 106537744
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Entry
106537744 CDS
T06107
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106537744 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106537744 (RRP1B)
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106537744 (RRP1B)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106537744 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
106537744
NCBI-ProteinID:
XP_013907439
UniProt:
A0A6I9WWY4
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MAPAAVSAGQSPEIQFAQRLASNEKRIRDRALKKLRGYMTLRTQSLEGCFSQEELLKIWK
GLFYCMWMQDKPLLQEELSNNISQLIHLIENMDTRHLFIQTFWQTVNREWNGLDRLRLDK
FYMLIRMMLRQSFEVLKRNEWNESLIERFLNMLIMEVMHPNSHAPIGIKLHFIDIYLEEL
ANIGAKELTAGQNIKFIEPFCKIIARTKDHLMLQAIICGIFETIVDQSPFAIEDLMEELE
TGSDIDSFSENEKWSDKEDTEMARGKGFSNKQPPNSEAHGHISKDIEANIGPVLQNLWLM
AILILMSFSGSFPQDDFPEDVSTDEDDDTFSRRKLKRKSGKMLDKAQLGEKDNSQMQKND
SEEEEANTGLQKKRKKRKRKSSQKAGTSMPSRNNDNRQVSVESKTPDPANESSNIRKRQK
SSSTENNEVASVILIERLGDDSSLKSLTCLANGIKKPSPHKNESLPKVPIKIVCQNGQNY
DSEEDPSYYTTGGHTGKIMKRQQKSKPGITGKLLSEESVNREKKSLVESEPVVLQKVKLK
RKKMLGNLGRIICSKRKTIGLKMQRKSKKAPNSTERNELENKKRKKEETGSIALPIKKTK
AKVENDFVKFEKTTLPKPAFFRKAKRGITAMPLSKLQSSSSKKVTFGLNKNMTAEFKKTD
KSILVSPQGISRVAFNPKQKPPHGVLKSSSSSLMEIPQIKKSLITPAKKRPTAMDFF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctgctgtctctgctggacaatctcctgagatccaatttgctcagaggttg
gcctcgaatgagaaacggattcgggatcgggcactgaaaaagctacgtggctacatgacg
ctcaggacccagagtctagagggttgcttcagtcaagaagaattgttaaaaatatggaaa
ggattattttactgtatgtggatgcaggataaacctctcttgcaggaggagttgtcaaat
aatatatcacaactaatccatttaatcgagaatatggatactcgacacttgttcattcag
actttctggcaaactgtgaatcgtgaatggaatggattagaccgattgcgtctagataaa
ttttacatgttgatccgcatgatgctgagacagtcctttgaagttctgaaaagaaatgaa
tggaatgaaagtttaattgaacgatttctgaacatgttaataatggaagttatgcatcca
aacagccatgcccccattggtataaaattgcatttcattgatatctatctggaagaactg
gctaacattggagctaaagagctcacagcaggccagaacattaaatttattgaaccattc
tgcaaaatcattgccaggaccaaggatcatcttatgctgcaagccataatttgtggcatc
tttgaaaccattgtggatcagtccccatttgccatagaagatttaatggaagaactagaa
actggcagtgatattgacagtttctcagaaaatgaaaaatggagcgacaaagaagataca
gaaatggccagaggcaagggcttttcaaacaaacagcctccaaattcagaggcacatgga
catatttcaaaagatatagaagctaacattggacctgttcttcagaatctttggcttatg
gcaattcttattctgatgtccttttcagggagtttccctcaagatgatttccctgaagat
gtctctacagatgaggatgatgataccttcagcaggaggaaattgaaaagaaaatctggc
aaaatgttagataaagctcagttgggggaaaaagacaacagtcaaatgcaaaagaatgat
agtgaggaagaagaggccaacacaggactacaaaagaagaggaagaaaagaaagagaaaa
tccagtcagaaagctggtacttccatgccctctagaaataatgacaatagacaagtcagt
gttgaatccaagacaccagatccagccaacgaatcctcaaatatcaggaagcggcagaag
tcttcaagtacagagaacaatgaagttgcttcagtgattctcattgaacgacttggtgat
gattcttccttgaagtcacttacatgtttagccaatggcataaagaagccttctccacac
aaaaatgagagcctgccaaaagttcctataaaaatcgtgtgtcagaatggacagaattat
gacagtgaagaggaccctagttattatactacaggaggccatactggtaaaattatgaag
aggcagcagaaatcaaagccaggaatcactggaaagcttttatctgaagagagtgttaat
agagagaaaaaatcccttgtagagtcagaacctgttgtgctccagaaagtcaagttgaag
agaaaaaaaatgttggggaatttgggaaggattatatgctccaaacggaaaacaattggc
ttgaaaatgcaaagaaaaagcaagaaagccccaaattccacagaaagaaatgaacttgaa
aacaagaagaggaagaaagaagaaactggtagtattgcccttccaataaagaaaacaaag
gccaaggtggaaaatgattttgtaaagtttgaaaagacaactttaccaaagccagccttc
tttagaaaagctaaaagaggcattaccgccatgccgttaagcaagctacaatcttccagc
tccaaaaaggttacctttggattgaataagaatatgactgctgaatttaagaagacagac
aaaagtatcttagtcagtccacagggaatctcccgggtggctttcaatcctaagcaaaaa
ccaccccatggggtcctgaagtcttcctctagctctttgatggaaatccctcaaataaag
aagtctcttataactccagctaagaagagaccaactgctatggatttcttctaa
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