Thamnophis sirtalis (common garter snake): 106537772
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Entry
106537772 CDS
T06107
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106537772 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106537772 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106537772 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_N
Laminin_B
Laminin_I
Laminin_II
Laminin_G_3
JAG1-like_EGF2
3keto-disac_hyd
IML1_N
Motif
Other DBs
NCBI-GeneID:
106537772
NCBI-ProteinID:
XP_013907527
UniProt:
A0A6I9X142
LinkDB
All DBs
Position
Unknown
AA seq
2809 aa
AA seq
DB search
MGGRACGWQLLLPALLLLGGVQGQLRGLFPAILNLASNAHISTNATCGEKGPEMFCKLVE
HVPGRPLRNAQCRICDYNSANSKEQHPISNAIDGTNHWWQSPSIQNGREYHWVTITLDLR
QTFQVAYIIIKAANAPRPGNWILERSVNGIEFSPWQYYAISDTECLTRYNVTPRLGPPTY
KKDNEVICTSYYSKLVPLEHGEIHTSLINGRPSADDLSPTLLEFTSARYIRLRLQRIRTL
NADLMTLSHHDPKDVDPIVTRRVSPYDNHPCRPCECDLFGSFGFDCVKDNNHADPQRGIH
PGQCHCKEGYAGKKCDYCAFGYKGYPNCIRCNCSLVGSINDDPCTEPCLCKENVEGENCD
RCKSGFYNLQERNPQGCTECFCFGVSDVCESLPWSATKVSSMTGWEMTIPYSSKTMKPQE
DQFDKSHQISINDTEVAKVLNPPYYWSAPKSYLGNKLTAFGGYLKYTVSYDIPMDSTDSD
LVSSVDVIIQGNGHILSTRSEGLSLQPYEEYSSTVHLISENFVDFNTKKSIDRDTLMTVL
VNVTHILLRASYNTAEKSVYRLDSVTLDTANANLIDLSSAVHVEYCECPQGYSGISCESC
VPGYYRVDAILFGGICLPCDCNGHATECDSHGVCIACEHNTTGQSCEQCLPGFYGMPSRG
TTEDCQPCACPLRSATNNFSPTCHLDSRGEVVCDKCAPGYSGVRCERCTNGYYGNPLLPG
KPCIPCDCNGNVNPLEDGHCHSVTGECLKCIGNTVGRHCERCADGYYGDAVTNKHCYACE
CDINGSVSNICHHETGLCQCKANVVGKRCDKCLFGYYGLSTTASCLPCHCSKIGSAEEDC
NEGGQCRCALGVAGDKCHNCAPGFYAFQEGGCKPCDCAHTHNTCDKDSGQCICPPHTTGE
KCELCEENFWGHDTEKGCKACNCSHLGSLSLQCDQLTSQCQCKQGYGGDRCSLCALGYRD
YPDCIPCDCDIRGSKAEMCNQGICSCEEETGVCVCKENVFGLHCNECKSGTFALHAVNPL
GCTPCFCSGMTELCAEVEGYVRVPVTLTPEQELLHVVSLSNFTGTSEGVFFQFPDIVMDA
ATVRQYLNAEPFYWKLPDQFQGNQNTWKYFNAVSDESVSHSDFMSVLSHIEYILIKASYG
QGLQQSRISNVSMEIAVKADHMPWAKEPAHHIEKCLCPRGYAGLSCQDCAAGYYRERHEN
AHLKVLPSVVSLCVPCQCNNHSSACDPETGKCSDCKDNTVGDHCNICAPGYYGKIKGSIN
DCSPCACPRMSPESFSPTCVAKDIKDFHCNNCVTGYEGQYCERCSPGYYGDPTVPGGKCQ
QCQCNPNGSLHHHCDHTSGQCVCKQGVIGQLCDQCDSRHILVENECVSCDDDCTGQLLDD
LDNFGKAMLLVNFTGAILAPYGTLSDLENATKHLKESLGIEESSNSLMKIMNGNLDTISN
VSDEYYKELTRILERGEHLNNATEGTLKKSKELAKFINTFQATIKVLVEMAATINMTGAS
DFPQSNKTLQKLQDDIPKRLDIMRGRYFQQLHQDSIHELKDAEKLLTQIQREYWRPQQKI
KDFQKAAKLALSDHSIKHQEAQDVVNIANSNTEEARRLLVPINNNLNEFNNKKLNVKEDE
ELSVTLIKEGKIQTTAAATFARDIFNSTSDLEIHQDELMLWSSKLRQHVDDLVMQMSTRG
ALELVYKTEDHAAELEKNVHELDSGLLNVRNVTVNVTNSVYVYSTIRNLVESAENLASDV
TKIIYEPIHVQRGPFNTTGKNVLQLSSTVLMDAKHLHKKYDGLRSGLNEINIKVERLKAK
ASGIAKRFNDSLLQLTALPRDTNENILAIKGLALSANLTALNGIRRTDGFSEKLWNSSSA
LSKVNDTLQKTNELIIDSTNAAASAEKKVNEVEIQAGLLYGRLKPLKILEENLSRNISEI
KELINQARKQAASIKVAVSVEKDCIRAYQPQILSTNYNTLTLNVKTMEPDNLLFYLGSNG
KTDFMAVEMRRGKVAFLWDLGSGSTRLEYPDLSINNNKWHRIHATRFAKTGTLSVEETSS
PQKPVRRSATSPGTATVLDVNPSTLMFIGGLGGQIKVKGLLPQYEDPSFNFDGSGYSVVE
KALRSTVTQIIVFFNTFSTNGLLVYLASNGTKDFLSLELVDGRIKVTVELGSGPLTLKTE
NRYNNGTWYKLSFSRNKKEGILAVMDAYSLNSKEIKQGESPGVASDLNRSDKEPIYIGGL
PRSRTVRKGVQSRTFVGCMKNLEISRSTFDLLKNSYGVRKGCILEPIRRSNILHNGYIEL
PPKPLLVESELMATFSTKNSSGIILVGLSKGEAKRRRRQVHLPFFSIMLVNGHLAVQVLA
GDRATAKRVLVKSTNGTYSDGNEHSVILTRNKRIINVQVDDSKPEEIRLGLMAESRPINI
SKLFIGGIPAGESISGLIIMDSFYGCIANVIFNTEFLDFTTAVRYEGVDMDSCFHSETSK
PAIQPVDFEIRSETQMLPSSLKSFSQTKEKQCAKRGELKYISNAHQFGVNKNSHLMLLFN
QSTVRKKFSVQLSIRTLASSGLIYYTAHQKQVDYAALQLQEGKLRFAFDLGKGQSIVSHE
AMISDGKWHTVKTDYAKRKGVIIVDGQATEAVNVSGDGSTLDVDGKLYLGGLPLGYLTKN
IRNITHSIPACISEVTINSKQLDSLVSIFAVNKCYAAIQKGTYFDGSGFAVLVREGYKVR
SEVNITFEFRTNVVNGILFGISSAKIDAIGLEIVNGKILFNVNNGAGRITASYEPKGMSN
MCDGQWHKVEARKNKHHIALTVDGNVVQTDNPHVHSTSADTNNPIYVGG
NT seq
8427 nt
NT seq
+upstream
nt +downstream
nt
atgggcggccgcgcctgcgggtggcagctgctgctcccggctctgctgctcctcggcggc
gttcagggtcagcttcgaggtttatttcctgccattctaaacctagctagtaacgctcat
atcagcactaatgctacttgtggtgaaaaaggccctgaaatgttttgtaaacttgtggag
cacgttccaggccgacccctacgtaatgcacagtgtcgaatttgtgattacaatagtgca
aattccaaagaacaacatcctatctcaaatgctatagatggtactaatcactggtggcaa
agtcctagcattcagaatggaagagaataccattgggtaacaataactctagacctaaga
cagacctttcaagttgcttacatcatcataaaagctgctaatgctccaaggcctggaaac
tggattttggaacgttctgtgaatggtattgaattcagcccttggcaatactatgcaatt
agtgataccgagtgtctaactagatacaacgtgacaccaagacttggtcctcctacatac
aagaaagacaatgaagttatatgcacttcctattattctaaacttgttccacttgagcat
ggagagatacacacatcactgatcaatgggagacccagtgctgatgacctttcaccaaca
ttactggagtttacctctgcaagatatatccgtctccgattgcagcggataagaactctt
aatgctgatctcatgacacttagtcaccatgatcctaaagatgttgatcctattgttaca
agaagggtgtctccttacgacaaccatccttgccgtccatgtgagtgtgatttatttggg
tcctttggctttgactgtgttaaggataataatcatgctgacccccaaagaggtattcat
ccaggtcaatgtcattgcaaggaagggtatgctggaaaaaaatgtgactattgtgccttt
ggctacaaaggttatccaaattgcatacgctgtaattgtagcctcgttggcagcataaat
gacgatccatgtactgaaccttgcctttgcaaagaaaatgtagaaggagaaaattgtgac
cgttgcaaatctggattctataatctccaagaaagaaacccacagggttgcacggaatgc
ttctgttttggtgtttctgatgtgtgtgaaagtcttccttggtccgctactaaggtgtct
tctatgactgggtgggagatgacaattccatattcttcaaaaactatgaaaccccaagaa
gatcagtttgataaatctcatcaaataagtattaatgacactgaggttgcaaaagtacta
aaccctccttattactggtctgcacctaaatcataccttggaaataagctcactgccttt
ggtggctatttaaagtataccgtgtcatacgatattcccatggacagtacagatagtgac
ttggtatctagtgtcgatgttattatccagggcaatggacatattctgtctacaagatct
gaagggctgtctttacaaccatatgaggaatattccagtacagtgcatcttatatctgaa
aactttgttgattttaatacgaagaagtcaatagatcgtgacaccctgatgactgtttta
gttaatgtgacccatattctactaagggccagttacaacactgcagaaaaatctgtatat
aggttggactctgtgactttggatacagcaaatgctaatctcatagatctgtcttcagct
gtacatgtagaatattgtgaatgtccacagggttactctggaatatcttgtgaatcctgt
gttcctgggtactatcgagtggatgcaatacttttcggagggatttgcctgccgtgtgat
tgcaatggtcatgcaactgagtgtgatagtcatggtgtttgtattgcttgtgagcataat
accacagggcaatcttgtgagcagtgtttgccaggattctacggaatgccttccagggga
accacagaagattgccagccatgtgcctgtccactgagaagtgctactaacaatttcagt
cctacttgtcatttggatagcagaggtgaagttgtctgtgataaatgcgctccaggttat
tcaggagtcagatgtgaaagatgtacaaatggatattatggcaatcctttattgccagga
aaaccttgtattccttgtgactgcaatggcaatgtaaacccattggaagatggccactgt
cattcagttacaggggagtgtttgaaatgcattggaaatactgtgggacgtcactgtgaa
aggtgtgctgatggctattatggggatgcagtgaccaacaaacattgttatgcttgtgaa
tgtgacataaatggctcggtttccaacatctgtcatcatgaaactggtctctgccaatgc
aaagccaatgtagtcggaaagagatgtgataaatgcttgtttggttattatggcctcagt
actacagctagttgccttccctgccattgcagtaaaattggctcagctgaagaagattgt
aatgaaggaggacagtgtcgctgtgcactaggagtggctggagacaagtgtcataattgt
gctccagggttttatgcatttcaggagggtggttgcaaaccttgtgattgtgctcatact
cacaatacttgtgataaagattcgggacaatgcatttgtcctcctcatacaactggagaa
aaatgtgaactctgtgaagaaaatttctggggtcatgatacagaaaagggatgcaaggct
tgcaattgtagtcatttaggttctctcagtctccagtgtgaccagttgacttctcagtgc
caatgtaagcaaggttatggaggagacaggtgttccctgtgtgctttaggttacagggac
tatcctgattgtatcccttgtgactgtgatatccgtgggagtaaagcagagatgtgcaat
caaggaatctgcagctgtgaagaggaaacgggtgtgtgtgtttgcaaggaaaatgtgttt
ggattgcactgcaatgaatgcaaaagcgggacctttgctctacatgctgtaaatcctttg
ggatgcaccccttgcttctgttctggcatgacagaactctgtgcagaagtagaaggttat
gtgcgagttccggtaacactgactccagaacaggaactattacacgtggtttctcttagt
aactttactggaacaagtgaaggtgtattttttcaatttccagacatagtaatggatgcg
gcaacagtccgccaatacttgaatgcagaacccttttactggaaattaccagatcagttc
cagggaaaccagaatacttggaaatactttaatgctgtttcagatgaatctgtttcacat
tctgacttcatgtcagttctgagccatattgaatatattcttatcaaggcttcatatggt
caagggttgcaacaaagcagaatctcaaatgtctccatggaaattgcagtgaaagctgat
cacatgccctgggccaaggaaccagctcatcacattgaaaaatgcctgtgccctcgaggt
tatgcaggactatcctgtcaggactgtgcagcaggatactatagggagaggcatgaaaac
gcacacctaaaagtgttgccctcagtagtttcactgtgtgtgccctgccagtgcaacaat
cacagcagtgcttgtgatccagaaacagggaaatgttcggactgcaaagataatactgtt
ggtgatcattgcaatatttgtgcccctggttattacggcaaaattaaaggatccatcaat
gattgttcaccatgtgcatgtccaagaatgagtcctgaaagctttagtccaacatgtgtt
gcaaaagatataaaggatttccattgcaataattgtgtcactggatatgaagggcagtat
tgtgaaagatgttctccaggttactatggagatcctacagtaccaggtggaaaatgtcag
caatgtcagtgcaacccaaatggttctctccatcaccactgtgatcatacttctggacag
tgtgtttgtaagcaaggtgtaataggacagttgtgtgatcagtgtgattcaaggcacatt
cttgtggagaatgaatgtgtttcttgtgatgatgactgtacagggcagttgttggatgat
ctggataattttggcaaagctatgcttttggtaaactttactggtgctatcttggcacct
tatggaacactttcagacttggaaaatgccacaaaacatttaaaggaatctttggggatt
gaagaaagttcaaactctttaatgaaaattatgaatggcaatcttgatacaatatcaaat
gtttcagatgagtactacaaagagttaacaagaatactagaaagaggagaacatctcaac
aatgctacagaaggtaccttgaaaaagagtaaagaattggctaaatttatcaacacattt
caggcaactattaaagtgcttgtggaaatggcagctactattaacatgacaggtgctagt
gatttcccacaatcaaataaaacacttcagaaattgcaagatgatattcccaagaggttg
gacataatgcgtggaagatatttccagcaactgcatcaagatagtatacatgaattaaaa
gatgcagaaaaattgctgacacaaatccagagagaatattggagaccacagcaaaaaatt
aaggactttcaaaaagcagcaaaacttgccttatctgaccatagcatcaaacatcaagaa
gcccaagatgttgttaatatagcaaacagtaacactgaagaggccagacgtctgcttgtt
cctattaataacaacctcaatgagttcaataataaaaagctgaatgttaaagaagacgag
gagctctctgttacactgataaaagaaggaaaaatccaaacaactgctgctgccaccttt
gcgagggatatatttaattccacgtctgatctagaaatccaccaggatgaattgatgtta
tggagtagtaaattaagacaacatgtggatgacctggttatgcagatgtctactcgaggc
gctcttgaacttgtctataagacagaagatcatgctgctgagttggaaaaaaatgttcat
gaattagacagtggccttttgaatgttagaaatgtgactgtgaacgtgacaaattctgtc
tatgtgtactctactatcagaaatctagttgaaagtgcagagaatctggcaagtgatgtc
actaagattatctatgaaccaatacatgtgcaaagagggccctttaacactactgggaaa
aatgttcttcagcttagctccacagtcttaatggatgcaaaacatcttcacaagaagtat
gatggactcaggtcagggttaaatgaaattaatataaaagtggaaaggcttaaagcgaaa
gccagtggaattgctaaaaggtttaatgattccctacttcagctgactgcattgcccaga
gatactaatgaaaatattttggcaataaaagggctagctctttctgctaatttgactgcc
cttaatggtatacgccgtactgacggttttagtgagaagctgtggaattcttcatctgca
ttatctaaagttaatgatacgttgcagaaaacaaatgaacttataattgactcaacaaat
gctgcagcatcagctgaaaaaaaagtgaatgaagttgaaatccaggctggtctgttatat
ggaagattgaaacctttgaaaatactggaagagaatttaagcagaaacatctctgaaatt
aaagagctcataaaccaggctcgcaaacaggcggcttctattaaagttgcagtatctgtg
gaaaaagactgtattcgggcctaccaaccccagatattatctactaactacaatacatta
acattaaatgttaaaacaatggaacctgacaatcttttgttctatctgggtagcaatggt
aaaactgatttcatggcagtggagatgagacgtggcaaggtagccttcctgtgggatttg
gggtctggatcaacaagactggaataccctgatttatctattaacaacaataagtggcat
agaatacacgctacaaggtttgcgaaaactggcactctgagtgtagaggagactagttct
cctcagaagcccgtcagaagaagtgccacgtcccctggaacagccactgtgctagatgta
aatccatcaactctaatgttcattggtggacttggaggacaaatcaaggtgaaaggttta
ctcccacagtatgaagatccttcatttaattttgatggcagtggatattcagtggtggag
aaagcacttcgctccactgtgacccagataattgtatttttcaacactttttcaactaat
ggactcttagtatacctggcttccaatggcacaaaggattttttgtctctggagcttgtt
gatggcagaattaaagtaaccgttgagcttggctcaggtccacttacacttaaaacagaa
aaccgctacaataatggaacatggtataaactttcattcagccgaaacaaaaaggaaggg
attttggcggtcatggatgcttatagcctcaattctaaagaaatcaagcaaggagaatcc
cctggtgttgcctctgacctgaatcgttctgataaagagccaatttacattggagggtta
ccacgatcaaggacagtaaggaaaggggttcaaagcagaaccttcgtgggatgcatgaag
aacttggaaatatcccgatctacttttgacttgcttaaaaattcatatggtgtgagaaaa
ggctgcatcctagagcctatacgcaggtctaatatcttacataatggttacattgagttg
ccacccaaaccccttttggtggaatctgaacttatggctactttttctacaaagaactcc
agtggaatcattcttgtagggcttagcaaaggtgaagcaaaacgaagacgcaggcaagtc
catcttccctttttctccatcatgctagtgaatggtcacttggctgtgcaggtccttgct
ggtgaccgagcaactgcaaaaagggtcctggtcaagtctaccaatggaacttacagtgat
ggaaacgaacattctgttatcctcactcggaataagagaataataaatgtacaagtggat
gatagtaaacctgaagaaattagacttggactaatggcagaaagcagaccaattaatata
tcaaagctcttcattggtggaattcctgctggagaaagcatttctggattaataatcatg
gattctttctatggttgtatagctaatgtgatatttaacacagaatttctggatttcacc
actgcagtaaggtatgaaggtgttgatatggacagctgctttcattcagaaacatctaag
cctgctattcaaccagtagactttgaaatccgatctgaaacgcagatgctgccaagttct
ctaaagtctttttcacagactaaggaaaaacagtgtgcaaaaaggggagagctgaagtac
atttccaatgcccatcagtttggcgttaacaaaaacagtcatttaatgttacttttcaat
cagtctacagtaagaaaaaagttttctgtccaattaagcatcaggacccttgcttctagt
ggtctaatatactacacagctcatcagaagcaagttgattatgcagcccttcaactacaa
gaaggaaagcttcgttttgcatttgatcttggaaaaggacagtcaatagtttctcatgaa
gcaatgatcagcgatggaaaatggcatacggtaaaaacagattatgctaaaaggaaaggt
gtaatcatagttgatgggcaggcaactgaagctgtcaatgtttcaggtgacggaagcacc
ttggatgtggatgggaaattgtatttgggaggtctacccttaggttacctcacaaagaac
attagaaatattactcacagcattcctgcatgtattagtgaagtaaccattaatagcaag
caattagatagtctggtttcaatttttgctgtgaataaatgctatgctgcaatccagaaa
ggaacttactttgatggaagtggttttgctgttcttgttagggaaggctataaagtcaga
tctgaagttaacattacatttgaatttcgtacgaatgttgtgaatggaattctttttgga
atcagtagtgctaaaatagatgccattgggctggaaattgtaaatggaaagattttattc
aatgtcaataatggagctggcagaataacggcttcctatgaaccaaaaggaatgtctaat
atgtgtgatggacagtggcacaaagtggaggctaggaaaaataagcatcatattgctcta
acagtcgatggaaatgtggttcagactgataatccacatgttcattcaacctctgcagat
acaaataaccccatttatgtcggaggg
DBGET
integrated database retrieval system
