Thamnophis sirtalis (common garter snake): 106537818
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Entry
106537818 CDS
T06107
Symbol
RANGAP1
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106537818 (RANGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106537818 (RANGAP1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106537818 (RANGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CPSF100_C
Nop14
NTS_TR130
DUF4589
Prothymosin
MCR_beta_N
RRN3
CobT
Sigma70_ner
BUD22
Motif
Other DBs
NCBI-GeneID:
106537818
NCBI-ProteinID:
XP_013907553
UniProt:
A0A6I9X898
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEDVIKEIEEFDGLEALRLEGNT
VGVEAAKVIAKALEKKSQLKRCHWSDMFTGRLRSEIPCALISLGEALISAGCQLVELDLS
DNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAGALKECHRKSTAQGKPL
ALKVFMAGRNRLENDGATALAEAFTVIGTMEEVHMPQNGINHPGITALAEAFAVNPLLRV
INLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNL
SFCEIKLDAGLIVAEAIEDKSELEKLELNGNCFGEEGCEQLQDILEGFNMGEILGSLSED
DGEDDEEEEEEEEEEEEEEEEEEEEEEEEEEEPLQAQERGQGEQEPLTPKKILEEHDSIP
LSSPLPPVDVGTFLAFPSPEKLLRLGPKCSTLIIQQTDTSDSEKVVTVFLKISSVFKDET
VVKTAVFETTDALMREAFSSANFNSDAFITSLLIHMGLLKSEEKIRAVPSLYGPLMTLNH
MVQQDYFPKSLVSILLAFVTKPNRALDPCSFARHLLLQTLHQL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagatataactaagcttgcagaatcacttgctaaaacccaagtgggcgga
gggcagctgagctttaaaggcaaaagtctgaaactcaatactgcagaagatgctgaagat
gtgatcaaagagattgaggagtttgatgggctagaagccctgcgtttggaaggaaatact
gtgggagttgaagcagcaaaggtcattgccaaggcactggagaagaaatctcagctcaag
aggtgtcattggagtgatatgttcaccgggagactgagatctgagattccctgtgctttg
atttctcttggagaagccctcatttctgctggctgccaacttgtagagttggatttgagt
gataatgcctttggaccagatggagtccgtggatttgaggcattgctgaagagtcctacc
tgtttcactctgcaggaactgaagttaaacaattgtggcatgggtattggtggtggcaag
atcttagcaggagctctgaaagaatgtcacaggaaatcaactgctcaaggcaagccgttg
gctctgaaagtatttatggctggcaggaaccgcctggaaaatgatggtgcaactgctctt
gctgaggcattcacagttattgggactatggaagaagttcatatgccacagaatggaatc
aatcatccaggaattacagccttagctgaggcctttgctgtcaatcccttgctgagagtg
attaatttgaacgataatactttcactgagaagggagctgtggctatggcagaaaccctc
aagaagctccgtcaagtggaaacgatcaactttggggattgtctggtgcgttcaaaaggt
gctgtggctattgctgaagctgttagtgaaggccttcataaactaaaggaactcaactta
tccttctgtgagatcaaattagatgctgggcttatagttgctgaggctattgaggacaag
tcagagctggagaagttagagctcaatggcaattgttttggagaagaaggctgtgaacag
ctccaggatatccttgagggcttcaatatgggagagatcctaggctccctgagtgaggat
gatggagaagatgacgaagaggaggaggaggaagaggaagaagaagaggaggaagaagaa
gaagaagaagaggaggaggaagaagaagaagaagagccacttcaggcgcaggagagggga
cagggagaacaagaaccccttacacctaaaaaaatattagaggaacatgattctatacca
ttatcctctcctcttcctcctgttgatgttggcacctttctggcttttccatcaccagag
aaattgttgcgacttggccccaaatgttcgactttgataattcagcagacagacacatct
gactcagaaaaagttgttactgttttccttaagatctcctctgtcttcaaagatgagacc
gtagtaaaaacagcagtgtttgaaacaacagatgctttgatgagagaagctttttcatca
gccaacttcaattctgatgctttcataacaagtcttttgattcacatgggattgttaaag
agtgaagagaagatcagggctgttcccagcctttatggccctctaatgacactgaaccac
atggtacagcaggattattttcccaagtcccttgtctcaattctcttggcctttgtcaca
aagcctaaccgtgctttggatccctgctcttttgctcgacacctgctattacagaccctc
caccagctgtaa
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