Thamnophis sirtalis (common garter snake): 106537905
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Entry
106537905 CDS
T06107
Symbol
ITGA8
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8
KO
K06584
integrin alpha 8
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04514
Cell adhesion molecules
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106537905 (ITGA8)
04514 Cell adhesion molecules
106537905 (ITGA8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106537905 (ITGA8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106537905 (ITGA8)
04810 Regulation of actin cytoskeleton
106537905 (ITGA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106537905 (ITGA8)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin alpha subunits
106537905 (ITGA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
106537905
NCBI-ProteinID:
XP_013907664
UniProt:
A0A6I9WXK1
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MWRRRRRLPSLPTSSAWCRRCAASDIAVLSLLLLLAGPLSAFNLDEEKRVVYSGPDGSYF
GYALDFYSPAPNAVSVLVGAPKANTTQPDIVEGGAVYYCPWPGTECKQIPFDNKNNRKIK
VNSTREPLEFKSNQWFGATIRTHKENVVACAPLYHWRTLKATSEKDPVGTCYVAIQNFTT
YVEYSPCRNNNPDPEGQGYCQAGFSLDFYKNGELILGGPGSFYWQGQVITSSIADVIKDY
SFRNILRKLFQEKQTGVAPSIYDDNYLGKKILCXFNCSFLSELVAGVPRGAQNFGYVTII
NSTDLTFIQNFTGKQMASYFGYTIAVSDINNDGMDDILVGAPLFMEREFESNPKEIGQVH
LYLQDAVLSFKEAQTLSGTEVFGRFGNSIAPLGDLNQDGYRDVAIGAPFAGEDRRGRVFI
YNGDRNGLNPNPSQILTGLWASQPMPAGFGFTLRGDSDIDQNDYPDLIVGAFGVGKVVVY
RARPVVTINAQLLLSPVIVNPENKTCQLPGSMTLVACFTVAVCASFQSPGFSDNIILKAE
LQLDSLKTKGAVKRTLFLDYHQSQHVFSFMITAQNWPTCKDFVVYLRDETEFRDKLSPIN
ISLNYKLDESTFSDVLAVNPILNYYQENRIEKQAYILVDCGEDNVCIPDLKLSVMPDRDQ
LVIGEENYLMLTINSRNEGEGAYEAELHITIPPEADYTGVERNNKALRVLSCDYKMENET
RTVICDLGNPMAAGTNFSAGIKFTVQHFENPELSIEFKLQVRSSNKVNPNSNLVELKIDI
SAIAHVQIRGVSHPPQIVLPIHNWKPKDEPTKEDEIGPLVEHIYELHNIGPSAINDTVLY
VEWPVLSKTEFLLYILHIQTHGPLKCQTSSAINSLDVKFTVPEDTPELAAFLHNSSISHS
VGRREAKLVEYQKNSAKILNCTNVECLMITCSVGLLEKGKSAALKIRSRLWASTFLQRKN
YRYALSISVSFEVKKMPYKVQPAKLPEGSIAIKTSVIWATPNISFIIPLWVIILAILLGL
LVLAMLTLALWKCGFFDRARPPRDDMAEKVHLTSDKTTDT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggcggcggcgtaggttgccatcgctgccgacttcgtccgcttggtgcaggcgc
tgcgcggcaagcgacatcgctgtcctctcgctgcttttgttgctggcggggccgctaagt
gccttcaacctggacgaagagaagcgcgtcgtctacagtggtccagatggtagttacttc
gggtacgcgctggatttttacagccctgcaccgaatgcagtaagcgtcctagttggagca
cctaaagccaacacaacccagccagacatagtggaaggaggagctgtctactattgccct
tggccaggcacggagtgtaaacagattccctttgataataaaaacaacaggaaaatcaaa
gttaatagtacaagagaacctctagaatttaaatcaaatcaatggtttggagcaacaatc
agaactcataaagaaaatgttgtagcttgtgctcccttatatcattggaggactctgaag
gctacttctgaaaaggacccagtgggcacctgctatgttgctattcagaattttactacc
tatgtagaatattctccttgtcgcaacaacaacccagatcctgaggggcaaggttactgt
caagcaggattcagcttagatttttataagaatggagaactcatattaggaggacctggc
agtttttactggcaaggtcaggttatcaccagcagtattgcagatgttatcaaagattat
tccttcaggaatattctaaggaaactatttcaggaaaagcaaactggagtggctccttct
atatatgatgacaattatttgggtaaaaagatattatgctaatttaactgttcatttctt
tcagaactggtagctggagttccaagaggtgcacagaactttggctatgttacgataata
aattccacagatctaacatttattcagaatttcaccggcaagcagatggcatcttacttt
ggatacactattgctgtatcagacattaacaatgatggtatggatgacatcctagttggt
gctcctctctttatggaacgtgaatttgagagcaaccctaaggagattggacaggtgcat
ctgtatctgcaggatgctgtcttatccttcaaagaagcacagacactgtctggcaccgag
gtttttgggcgatttggcaattctattgcacccctgggagatctcaatcaggatggttat
agagatgttgccataggtgctccatttgcaggagaagacagaagggggagagtattcatc
tacaatggagacagaaatgggttaaatcctaatccttcccagattctcactggcctgtgg
gcctcccagcctatgcctgcaggatttggatttacattgagaggagactcagacatagat
caaaatgattatccagatctaattgttggtgcatttggagttggaaaagtagttgtttac
agagcaagaccagttgtgacgataaatgctcagcttctgctctccccagtgattgtaaat
ccagaaaataaaacctgtcagcttcctggttctatgaccttagtagcctgttttactgta
gcagtttgtgcaagttttcaaagtccaggtttttcagataatataattctgaaagctgaa
ctacagttagattcactaaaaaccaaaggagctgttaagaggactctcttccttgattat
catcagtcacaacatgtcttctccttcatgataactgcacagaattggcccacttgcaag
gactttgtggtttatcttagagatgaaactgaatttagagataaattgtctccaatcaat
attagcttgaactataaactggatgaatccacattttctgatgtattagctgtgaatcca
atattgaattattaccaagaaaacagaatagagaaacaggcatacattcttgtggattgt
ggagaagacaacgtgtgcattcctgacttgaaactttccgttatgcctgatagggatcag
cttgtaattggggaagaaaactatctcatgcttacaatcaattcaagaaatgaaggagaa
ggtgcctatgaagccgagctgcatataacaatacctccagaagcagattacacaggtgtt
gagcggaacaacaaggcactacgtgtgctgagctgtgattataagatggaaaatgaaact
agaacagtgatttgtgatcttggaaatcccatggcagctggaacaaatttttctgccggc
atcaaatttactgttcagcattttgaaaatcctgaattgagcattgaattcaagctccaa
gtgcgaagttccaacaaagttaatcccaacagtaatttggttgaacttaagattgacatc
agtgcaatagctcatgtacagatcagaggagtctctcaccctccacaaattgttttgcca
attcataactggaaaccaaaagatgaacctaccaaagaagatgagattggacctttagtg
gaacatatatatgagttgcacaacattgggccaagtgccatcaatgatacagtcctgtat
gtggaatggccagtattgagcaaaacagaatttcttctttacatccttcacattcagaca
catggacctctgaagtgtcaaacaagttctgcaattaacagtttggatgtaaagtttact
gtcccagaagacactccagagcttgctgcttttttacacaattcctccatctctcactct
gttggacgtagggaagccaaattggtggagtatcaaaaaaactctgcaaaaattctgaac
tgcacaaatgtggaatgtttaatgatcacctgttcagtggggctcttggaaaaagggaaa
agtgctgcattgaaaatccgatctcgtttatgggcttcaacatttctgcagaggaaaaat
taccgctatgctctttccatcagtgtgtcatttgaagtaaagaagatgccatacaaagtt
cagccagcaaaacttcctgaaggaagcatagctataaaaacatctgtgatttgggctact
ccaaacatttcttttataatcccactgtgggttataatattggcaatacttcttggacta
ctggttctggctatgttgaccttagccttgtggaagtgtggtttttttgacagagccagg
ccacctagagatgacatggccgaaaaagtgcatctaacaagtgacaagactactgatact
tag
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integrated database retrieval system
