Thamnophis sirtalis (common garter snake): 106538008
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Entry
106538008 CDS
T06107
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106538008 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106538008 (PEX6)
Membrane trafficking [BR:
tsr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106538008 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
TsaE
AAA_lid_3
AAA_5
AAA_22
RuvB_N
nSTAND3
AAA_33
RNA_helicase
AAA_25
TIP49
AAA_7
NPHP3_N
Mg_chelatase
DUF815
AAA_14
Vps4_C
IstB_IS21
AAA_24
AAA_28
PEX6_4th
Parvo_NS1
bpMoxR
T2SSE
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-GeneID:
106538008
NCBI-ProteinID:
XP_013907834
UniProt:
A0A6I9WY22
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MSPSILVRRGEILPGSGLRVLESRPALQGLLGFGTRLAVAEWRSGVESRDRRDLQTPLVS
AWARRGERLVEVRRGHPALWGGDPAADQSLWVTPGCLHSLGLFQGEWVVVRRREGDLPGC
TASCLASVQVLRPQWYFPYGEKDDGHPQATSADTFLNESALIPASLAFNLSCDPLEGNLL
TIQRYGEAAGVQEIKGSRSLLSVPPIAKELHIEIVTSPTYNTRGIYDQILYQHFQTPRLV
QENDILCLPTVGHPEFLEENATKFIRWPELCFRVKRILPAENIQQSIGYLADTQNTSLFL
VGSTNSAIPSFPSHNGCNFWSSLSPAGLCSTVKQLCDILGPHLHNRETLLNGSGSILLSG
PSGVGKITAVRAACSRLNLHFFKVNCVVLCGDTRESTEVKLHNAFSEAELYSPCVLLMKD
VELLGRDRDGFGEDSSVILALRHLLLEREINTSYPVLVVGTTSKLADVPSDVQTAFLHEV
KIEAPTEEQRKAILSMLTQNFSLGKEVNLTKLAQQSAGFVLGDFCALLSHSSRAAYTRMQ
NSSSFPGGPNEEEEYDFYAAGFPLLAEDFSVALDKLHDAHSQAVGAPKIPSVFWQDIGGL
QNVKKEILDTIQLPLEHPELLSLGLHRSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKG
PELLSMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSQGVMDRVVSQLL
AELDGLHSSQDVFVIGATNRPDLLDSALLRPGRFDKLVYVGVNEDRDSQLQVLSAITRKF
KLDPAVNLLSVLERCPAELTGADLYALCSDAMLFAIRRKVEWIEEGLDTESSEFTLTMDD
FIQAATRLQPSVSETELLRYKLIQQKFAA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagccccagcatcctcgtacggcgcggggagatcctgcccggctcgggactgcgcgta
ttggagagtcgaccggctcttcagggactgctaggctttggcactcgcttggctgtggcg
gaatggcgaagcggagtcgagagccgggaccggagggacctgcagacgcctttggtttcc
gcgtgggcgcgccgcggggagcggctggtcgaggtgcggcggggccaccctgcgctgtgg
ggaggagaccccgcggcagatcagtctctttgggtgacccctggctgcttgcacagcctg
ggcctcttccaaggagaatgggtggtagtgcggaggcgcgagggagacttgccggggtgc
acggcctcctgtttggcctctgtgcaggttctcaggccccagtggtatttcccgtatgga
gagaaggatgacgggcacccccaagccacaagcgcggacacctttctgaacgagagtgca
ttgattcctgccagtctggctttcaatctctcctgcgatcctttggaagggaacctcctg
actatccagagatatggggaagctgctggcgtgcaagagataaaaggaagtcgatctttg
ctatctgtgccacccattgccaaggaactacacatagaaattgtgacttcaccaacatac
aacaccagaggaatctatgatcaaattctttatcagcactttcaaactcccaggcttgta
caagagaatgatattctttgtctcccaactgttggacatcctgaattcttagaagaaaat
gcaacaaagtttatcagatggccagagctgtgcttcagggtgaaaagaatattaccagca
gagaatatacagcaaagtatagggtatttagctgatactcagaatacttctttattcctg
gtaggttctacaaacagcgctattccatcttttccatctcataatggctgtaatttttgg
agtagtttgtctcctgctgggctttgcagtacagtgaaacagctctgtgacatccttggc
cctcatttacacaatagagaaactctgctaaatggatctggaagtattcttctttcagga
cccagtggtgtggggaaaattacagctgttagagctgcctgtagccgtctcaatcttcat
ttcttcaaggtgaattgtgttgttttgtgtggtgatacaagggaatctacagaagtaaaa
ctacataatgccttctcagaggctgagctttatagtccttgtgtcctgctgatgaaagat
gtagagctgctgggaagagatcgtgatggatttggggaagactccagtgtcattcttgca
ctaaggcaccttcttttggaaagagagataaatactagttatcctgtgctggtagtaggc
acaacaagtaaacttgcagatgtcccttcagatgtgcaaacagcattccttcatgaggtg
aaaattgaagcaccaactgaagaacagaggaaagccattcttagcatgctaacacagaat
ttttcactgggcaaagaagtaaacctgactaagctagcccagcagagtgcgggctttgtt
ctaggagatttctgtgctttactttcccacagcagccgtgctgcctatacaaggatgcag
aattcaagcagcttcccagggggaccaaatgaagaggaagaatatgatttttatgctgct
ggtttccctcttctagcagaagatttcagtgttgcactagataaacttcatgatgctcat
tcacaggcagtaggagccccaaagattccctctgtcttctggcaagatattggagggctt
cagaatgtgaaaaaggaaatcctggacactattcagcttccattggaacatccagagtta
ttgtctttaggccttcaccgctcgggccttctgctctatggtcctcctggaacagggaag
acattgctagctaaagcagtagcaacagaatgtactatgactttcctcagtgtaaagggc
cctgaacttcttagcatgtatgttgggcagagtgaagaaaacgtccgtgaagtgtttgcc
agagcgagggcagctgctccttgcattatcttttttgatgagcttgattcattggccccc
agtcgtggacgaagtggcgattcacagggtgtgatggacagagttgtatctcagttacta
gcagaactggatgggcttcactcttctcaagatgtatttgttattggagctacaaacaga
cctgatctactggattcagctttactaaggccaggcagatttgataaattggtttatgtg
ggggtaaatgaagaccgagattctcagctacaagtactgagtgccatcaccagaaagttt
aaactggacccggctgtgaatctccttagtgtcctagagagatgccctgcagagttaaca
ggagcagacttgtatgcactctgctcagatgccatgttgtttgctatcagaagaaaagtg
gaatggatagaagaaggtctggatactgaaagctcagaattcacccttaccatggatgat
tttatacaagctgcaacaaggttacagccttctgtttctgaaacggagctacttagatat
aaattgatccagcagaaatttgctgcttga
DBGET
integrated database retrieval system
