Thamnophis sirtalis (common garter snake): 106538020
Help
Entry
106538020 CDS
T06107
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106538020 (DCAF13)
04121 Ubiquitin system [BR:
tsr04121
]
106538020 (DCAF13)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
Other 90S particles
106538020 (DCAF13)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106538020 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
MIOS_WD40
ANAPC4_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
106538020
NCBI-ProteinID:
XP_013907863
UniProt:
A0A6I9X9C2
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKQDLQRVPRNYDPALHPFEIPREYTRALNATKLDRIFAKPFLA
SLDGHRDGVNCMAKHPESLSTVLSGACDGEVRIWNLMKRVCTRTLQAHEGFVRGMCTRFC
GTSFFTVGDDKTVKHWKMEAPAYGEAEEPINTILGKTVYTGIDHHWKKPIFATCGHQVDI
WDEQRTSPICSLTWGVDSINSVKFNPIEMNLLGSCTSDRNIVLYDMRQSTALKKVILDMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRFLGKALMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPADKGHSREIYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLTPRERAAINYNQKLKEKFQHHPQIKRINRHRHLPKMIYSQAKELRIMKEARRRKELN
RRKHSKPGSIPLVSEKQKHIMAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggttctgagcaggaacccggacgactatgtgcgcgaaaccaagcaggac
cttcagcgggttccacgaaattacgatcctgcgttacatccatttgaaattccacgggaa
tacacaagggcactaaatgcaactaaattagatcgcatatttgcaaaacctttccttgca
tcgttagatggtcatcgagatggagttaattgcatggctaaacatccggagagcttgtct
acagttctgtctggagcatgtgatggagaggttagaatctggaacctgatgaagcgcgta
tgcacccgtacattgcaagcacatgagggctttgtaagaggaatgtgtacccgtttttgt
ggcacctctttcttcactgtgggtgatgataaaacagtgaagcactggaaaatggaggca
ccagcttatggggaagcagaagaaccaataaataccattcttggaaagacagtgtacact
ggaattgatcatcattggaagaaacctatatttgctacttgtggtcatcaggttgatatc
tgggatgaacagagaactagtcctatatgttctttgacttggggagtcgatagcataaac
agtgttaaattcaatccaattgagatgaatcttttgggaagctgtacttcagacagaaat
attgtgctgtatgatatgagacaatcaactgccctaaagaaggtcattttggatatgaga
acaaatacactttgctggaatcctatggaagctttcattttcactgcagcaaatgaggat
tacaacttatatacttttgatatgcggttccttggcaaggctttaatggttcatatggac
catgtgtctgcagtcctggatgtggattactcccccacaggaaaagaatttgtgtctgcc
agctttgataaatctattcgcatttttcctgcagataaaggtcatagcagggagatctat
catacaaagagaatgcaacatgtcatcactgtcaaatggacatcagacaataaatacata
ttgtgtggctctgatgaaatgaacattcgtttgtggaaagcaaatgcttctgaaaagctg
ggtgtgcttactccccgagagagagctgctattaactataatcagaaattgaaagaaaaa
ttccagcatcatccccagatcaagcgcataaatcgccatcgtcacttaccaaagatgatc
tatagtcaagccaaagagctacgcatcatgaaagaagctcgtcggcgaaaggaactgaac
cgtcgtaaacatagcaagcctggatctataccacttgtgtcagaaaagcagaaacacatt
atggctgtagtaaaataa
DBGET
integrated database retrieval system
