Thamnophis sirtalis (common garter snake): 106538180
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Entry
106538180 CDS
T06107
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106538180 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106538180 (HEATR1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106538180 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
106538180
NCBI-ProteinID:
XP_013908084
UniProt:
A0A6I9WYQ5
LinkDB
All DBs
Position
Unknown
AA seq
2189 aa
AA seq
DB search
MTSLAHQLKRLALPQNDPSLLSRSEAASLLFDCKEAASIDRETFFAIGCTGLEELIGIDP
SFQIFETTLFSQISKGLERSVQTKAINQQLDENISLFLIHLSPYFMLKPAQKCLEWLIHR
FHIHLYNQDSLIGCVLPYHATKLFVRVIQLLKISDPTHKWHWLHPIQKPGVPLARGTLIT
HCHKNLGFMDFLCNLVTKSVKVFSQYPESSSEMRVLLTFYASTVVSALGAVANVTDILVS
RLLPYIQKGLKSSLVDFRAATYMIICQLTVRVTMEQSLVRSLMLLISKTLTKTHSLVKDG
LCCLIVLLQSQKEEGLGKKPYVHLCNVPNLIAILHEISAVHDVSPILHYLLPHLVHSAIY
GKAEMEEGSNTIDNQIYIKHLETILTTIPLEKDLDHLLACKFLEDYISYGVKNGSEINKA
EINKEVLPLIRLFERKYSRTLDLVLEKYLKNIRDQKEQDLFHQFISLSVSGGKYQFLEDS
NTSLLLSLNHSQPAVRVLAVQHLKEIIETSKEGFDDSFIQEAIVARLKDDNLDVVMSSLH
TLDSALVHLNIFSEQIGLSLLSLFERADLSKDKKWCKILETILCLLMKVDNIKDNKDLFN
QLVLHLLPFLVITNKDLESAEGRVAICITESGLCSLHPLLKGWPQVFQEVTKSSKSGDVL
GTSNAKLLDLLSKNLIAEDSSFMSEMVEGFISLIEKESLTGKQKLTGHILSFVLVQSCCS
CSQMGDRHLFLALRIFHFLSKKMDRFKDNCPSEENISTEFPYGNESFWDLLSTYANKLNI
QTSVDLEDAMLFIILLRSFIEGLVSPNSFLKDEVWWNPEILNADSKDYLHLLLGLFDIVV
RGASEGFCAGHFRAMMRLLFEVHLKGPEHQFRFLSVVWTYNYNLCNQLNFVMDAVLQTQA
LYIGCVMLESQPKQKKRQLVSTASPVIVSLLINLGSPVSEVRRASLKCLHSLSGVEESIF
HPVLQSFTKKAEEIMSDSTYVTQVLGDLFGGEPTQPKRKAKQQKLSEALTALLECVQDFR
CPSYIARNLVKILHEVNGSGVLLSLLPLLDRLLEKASGTGQMLRDEALLLHLVLGKYNEH
SSTLLCTNQECLHLFIKALHASQEVYQGLHPFQITALGQITKPFFAALPDGKVQQRILGA
LFDLLLNCKNLHCAQTIGSVFKGISVDAEQISIELEPQPKLKTVATVHQTRRQKIQQQRK
VQDQECVQEESTNWQRITLILELLQHKKKLKQPQALISTLFNLLSRCLEPTAGEENLEYT
KQLILGSLLNICQKLSPDSNRIKAGLLDEEKFNVELIVQCIRVSEMPQTHHHALLLLGTA
AGMFPVSSLEDDPGQKKSRPLRTQSYSQETELFDVESHSGKQLRHLKYLAVSFMSQLLAS
HSFVKKVVECEDSEELKELEQKYAEEDGRSSGTAGNIEGVVIKIIRVFVDAFPHVPEHRR
LPILEQLTSTLGAERFLWILLVLLFEQHVTKSGAAVASGEKDIALETDTEFWISVCCEFS
VIEQLQSLMKLLNYLTNLPENKEDDPGQKKSRPLRTQSYSQETELFDVESHSGKQLRHLK
YLAVSFMSQLLASHSFVKKVVECEDSEELKELEQKLLEKILCYINAVAQSIEKNANTLTA
KFWKVLLNKSYELLDKINSLIPTETFIPVLRGLMINQLPSVRRKAMDLLNNKLQQNTQWK
QTQVELLLELVPDLLSVVQHPEAEEQAINRQTALYSLKLLCKCFGREKHELFVAVLKVAI
EVISSDGKEERNVVGSALLCAAEITCVLKALAIPQLPRLMPALLNILKHKKDLVANEIYL
LSTVTALLKIVETLPRFLSPYLLNVLLQVVHLDRITVEMGPSSQVNLRVASLKTTLATKL
PSRVLLPAIAKCYGEIASASKNDVGTIMDVLKEHIVTLEKDQLSAHQSELTAFFTKALDF
RTEHAQDNLEKVGKIEARIIACLISMVMKLSEISFRPLFFKLFDWAKTEGAPKDRQLTFY
RLADCIAGELKGLFSLFAGHLVKPFADNLNQINTSKIDADEAYFDSEGDTEKSCLLLQYS
LDCLYKIFLFDSHHFVSKERAETLMLPLVNQLENMLGGEERFQERVTVHLIPCIAQFAVA
MADDALWKPLNYQILLKMRHASPKVRFAALLALLELAEKIRENYMVLLPESIPFLAELME
DECEEVEHQCQKTIQQLELILGEPLQSYF
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccttgcgcatcagctgaagcgccttgcgcttcctcagaatgatcccagcctc
ttatctagaagtgaagcggcttcattgctctttgattgtaaagaagctgccagtattgac
agagagactttttttgcaatagggtgcactggcttggaagagctgattgggattgacccg
tcctttcagatatttgagacaacacttttcagtcaaatatctaaaggtttggaacgcagt
gtccaaactaaagcaataaaccagcaactcgatgaaaatatttcattgttcctgattcac
ttgtctccatatttcatgcttaagcctgcacagaaatgtcttgagtggctgattcacagg
tttcatattcatctgtacaatcaagacagtttgattggctgtgtgttgccttaccatgca
acaaagctgtttgtgcgagttatccaacttttaaaaattagcgacccaactcataaatgg
cactggttgcatccaattcagaaaccaggagtccctcttgcacgaggaactttgattaca
cactgccacaaaaatttgggtttcatggatttcctatgcaacttagtgactaaatctgta
aaggtcttttcacaatacccagagagttcatcagagatgagagtcctgctgactttttat
gcttctacagttgtatctgctcttggggctgtagcaaatgtcacagacattcttgtctcc
agattgcttccatatatccaaaagggtttgaaatcatccttggtggacttcagagctgca
acgtatatgatcatatgtcagttaactgtgagggtgacaatggaacaatcactggttcgt
tccttgatgttgctgattagtaagactttgaccaaaacacactctcttgtcaaagacggg
ctttgctgcttgatagttcttctacagagccagaaggaagaaggacttgggaaaaagcca
tatgttcatctgtgtaatgtacccaatctgattgccattcttcatgaaatctcagcagtt
cacgatgtcagtccaattttacattatctgctgccccatctagttcattcagctatttat
ggaaaagcagagatggaagaaggatccaacacaattgataatcaaatctacattaaacat
ctagaaactatacttacaactataccgctggaaaaagatttggatcatttattggcttgt
aagtttctggaggattatatttcctatggtgtaaagaatggttctgaaattaataaagct
gaaattaataaagaagtacttcctctaatcagactttttgaaagaaagtactctagaacg
ctagatttggtactggagaaatatctgaagaacatcagagatcagaaggagcaagatctt
ttccaccaattcatttctctttcagtgagcggtggtaaataccagtttctagaagattca
aatacctctctgctccttagtttgaatcattcacagccagcagtgagagtcctggctgtt
caacatttgaaagaaataattgaaacatcaaaggagggctttgatgactctttcatacaa
gaagcaattgtagcacgactcaaagatgataatttagatgtggttatgtcatctctacat
acactagatagtgccttggttcatttgaatatatttagtgaacaaattggactcagtcta
ttgtctctgtttgaaagagctgatctctcaaaggataaaaaatggtgcaaaatcctagaa
acaatactatgccttttaatgaaagtagataatattaaggataataaagatctcttcaat
caattagtcctacatctgctaccttttctggtcataaccaacaaagatttagaatctgct
gaagggagagtggcaatttgcataacagagtctggtctttgttctcttcatcctttgttg
aaaggttggccacaagttttccaagaggtgactaagtcatctaaatcaggagacgtacta
ggtacatctaacgccaaactgctggacctcttgtccaagaacctgattgcagaagattct
tccttcatgtcagaaatggtggaaggtttcatcagtcttattgaaaaggaatctcttact
ggaaaacagaagctaacaggccacattttaagtttcgtccttgtccagtcgtgttgtagt
tgctcccaaatgggagatcgtcatttattcctggctttaaggatcttccattttttgagt
aaaaaaatggacagatttaaagacaactgcccttcagaggagaacatttctactgagttc
ccatatgggaatgaatctttctgggacctgttatcgacatatgcaaacaaattaaacatt
cagacctcggttgatcttgaagatgccatgctgttcatcattttgttgagaagttttatt
gaaggcttggtctctccaaattcctttttgaaagatgaggtctggtggaatcctgaaatt
ttaaatgcagacagtaaagattatttgcacctcctattgggactgtttgacattgttgtc
cgcggagcaagtgaggggttctgtgctggtcattttcgggcaatgatgcgacttctgttt
gaggtacatttgaaaggaccagagcatcaatttagatttctctctgttgtatggacttac
aactacaacttgtgcaatcagctgaattttgtgatggatgctgtgctgcaaactcaggca
ttgtacataggatgtgtcatgctcgaatcgcaacccaagcagaaaaaaaggcaattggtg
tcaactgcatctccagtaattgtatctctgttgatcaatttgggaagtcctgtaagcgaa
gtccgaagagcttctctcaaatgccttcattccttaagtggagtagaagaatccatattt
catcctgtgcttcagagtttcacgaagaaagctgaggaaataatgtctgattcaacttac
gttacccaggttcttggtgatctctttggaggagaacctacccaaccgaagcgaaaagcc
aagcaacagaaattgtcagaggcattgacggccttacttgaatgtgtccaggactttaga
tgtccttcctatattgcaagaaacctggtgaaaattcttcacgaagtcaatggcagtggg
gtgcttcttagcttgctgcctctcctcgatcggttattggagaaagcttctggtacagga
cagatgttgagagatgaagcccttcttttgcacctcgttcttgggaaatacaatgaacac
tcgtcaacactcctttgcacaaatcaagagtgcctacatctgttcatcaaagctttgcat
gcctcacaagaagtgtaccagggccttcatccttttcagattacagctcttgggcagatt
acaaaacctttctttgctgcactgccagatgggaaggtacagcaaaggattctgggagct
ctttttgacttactcctcaattgcaagaatctacattgtgcccagacaattggcagcgta
tttaaagggatttcagtagatgctgagcagattagtatcgaactggaacctcagcctaaa
ctcaagactgttgctaccgttcaccagacaagaagacagaaaatacagcagcagaggaaa
gtccaagatcaagaatgtgtacaagaagaaagtacaaactggcaaagaattacacttatc
ctagaattgctgcagcacaaaaagaagctcaaacagcctcaggctctgatatctaccctt
ttcaatttgctatctaggtgtctagaacctactgcaggggaagaaaatctggaatacaca
aaacaactaatacttggtagcttgttaaatatttgtcagaagctgtccccagatagcaac
aggataaaggcaggtctcctggatgaagagaaattcaacgtggaactgatcgttcagtgc
atccgggtctcagaaatgccacagacccatcaccacgcactgctcttgctgggcactgca
gctggaatgtttcctgtgagttcattggaagatgaccccggacaaaagaagtcaaggcca
ctcaggacacaatcctacagtcaagaaacagaactctttgatgtggagtctcactctggc
aaacagttgaggcatttgaaatacctggctgtctctttcatgtcacagcttctggcttca
cacagttttgtaaaaaaagtagttgaatgtgaagattctgaagagctaaaggaacttgaa
caaaagtatgcagaggaagatggtaggtcttcaggaactgcaggcaacatagaaggagtt
gtgattaaaataatccgggttttcgtggatgcctttccccacgtgccagagcatcggcgc
ctcccaattctagagcaacttacaagtactttgggggcggagcgatttctgtggattctt
ttagtactactgtttgaacaacatgtcaccaaatctggggctgcagtagccagtggggag
aaggatattgctttggaaaccgatacggaattctggatttctgtatgttgtgaatttagt
gtaattgaacagttgcaaagtttaatgaagctactcaactatttaacaaacctgccagag
aacaaagaagatgaccccggacaaaagaagtcaaggccactcaggacacaatcctacagt
caagaaacagaactctttgatgtggagtctcactctggcaaacagttgaggcatttgaaa
tacctggctgtctctttcatgtcacagcttctggcttcacacagttttgtaaaaaaagta
gttgaatgtgaagattctgaagagctaaaggaacttgaacaaaagttgttggaaaaaatt
ctttgctacataaatgcagtggcgcaatcaatagaaaaaaatgccaacactttgacagcc
aaattctggaaggttttgctcaacaaatcatatgaactactggataaaataaattcttta
attccaacagaaacctttattcctgtcctcaggggcctgatgatcaatcagttgccctca
gtgagacgtaaagccatggatctcctcaacaataaactgcaacagaacactcaatggaag
caaacccaggtggaactgctgctagaattggttcccgacctcctctctgtggtgcagcat
ccggaagctgaggagcaggcaattaataggcagacggccttgtatagcttgaagttgctg
tgcaagtgttttggcagagagaaacatgagctgtttgttgctgtgctaaaagtggccatt
gaggtgatttcttcagatgggaaagaagaaagaaatgtcgtgggaagtgctctgttgtgt
gctgctgagatcacctgtgtgttgaaagcattggctatacctcaacttccaaggcttatg
ccggcattgctaaatatactgaaacacaaaaaggacttagttgccaatgaaatttattta
cttagcacagtgacagctctactgaaaattgtggaaacgttgccacgcttcctcagccca
tatttgctgaatgtcctgctccaggtggtccacttggacagaattactgttgaaatggga
ccttcatcccaagttaatctacgcgtggcatctctgaaaaccactttggcaacaaaactt
ccatcaagagttcttctgccagcaattgccaagtgctatggtgaaattgcaagtgcttct
aagaatgatgtaggtactattatggatgttttgaaggagcacattgtaactctggagaaa
gatcagctctctgctcatcaatctgagctaacagcatttttcacaaaggctttggacttc
agaaccgaacacgctcaggacaatttagagaaggttggcaaaatagaagctcggattatc
gcatgtttaatcagcatggttatgaagctttctgaaatatctttccggcccctgtttttc
aagctctttgattgggccaaaactgaaggtgccccaaaggatagacagttaactttttac
cgcctggcagactgtattgctggtgagctaaaagggctgttcagcctatttgctggccat
ttagtgaaaccttttgctgacaatctcaaccagatcaacacatcaaaaatagatgcagat
gaagcttactttgactccgagggtgacactgaaaaaagttgcttattactacagtatagc
cttgactgtttgtacaaaatcttcctttttgattctcatcattttgtgagcaaagaaagg
gcagaaacattgatgctacctttagtcaatcagctggaaaacatgcttggaggagaagag
agattccaggagagagtgactgtgcatttgattccatgtatagcgcagtttgcagttgca
atggcagatgacgctctgtggaagcccctgaactatcagattttgctaaagatgaggcac
gcatcacccaaggttcgatttgcagctttgttggctttgttagagcttgctgaaaaaata
agagagaattatatggtgctactaccagaatccattcctttcttagccgagcttatggaa
gatgaatgtgaagaagtggagcatcagtgccaaaagaccattcagcagcttgaacttatt
cttggggaaccactccagagctacttttaa
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integrated database retrieval system
