Thamnophis sirtalis (common garter snake): 106538274
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Entry
106538274 CDS
T06107
Symbol
LRIG2
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
Ig_5
LRRCT
C2-set_3
C1-set
DUF4781
Motif
Other DBs
NCBI-GeneID:
106538274
NCBI-ProteinID:
XP_013908199
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MLVALLREAAGEPCAAAAPCSCRRGVLDCSRLRLSGRSLEPGLLPPLPRSITALDLSHNN
LLSSNWSIDSSGQMLQEVKMNHNELSGIPHFGELTSNITLLSLVHNSIQEIVSEQLQPYF
SLENLDLSSNFITEIKVSSFPHMQLKYLNLSNNRITTLEAGCFDNLSNSLIVLKLNRNKI
SMIPLKTLKLPYVQFLELKRNRIKVIESLTFQGLDSLKSLKMQRNGINNLMDGAFFGLNN
MEELELEQNNLTEVNKGWLYGLKALQKLYVSQNAINRIGPDAWEFCQSLSELDLSYNQLT
RLDDFAFIGVNVLEKLNLSDNRLSYIADGVFKGLSYLQILDLRNNEISWAIEDANEAFTG
LERLNKLILQGNQIKSITKKALSDLQALEYLDLTNNAIVSIEEGGFSQPLLKELLLNTSS
LLCDCQLKWLPRWLFHSRLQDTVNVVCAHPEWLAGRSILSVNTEDFVCDDFPKPQIRIHP
ETTVALRGVNVTLTCKAVSSSDLPISAAWRKDSEILYDADIENYVRYQQQDGEILEYTSI
LHVFNVNFTDEGKYQCIIFNHFGSNYSNKAKLTINELPTFVKTPMDLTVRTRAMAKLECA
AEGHPPPQISWQKDGGTDFPAARERRMHVMPEDDVFFIVNVKIEDMGIYSCMAQNVAGSI
SANVTLTVLETPSFVRPLEDRTVAQGETAVLQCIASGSPAPRLNWTKDDGSLTVTERHFF
AAANQLLIIVDAGLEDAGKYTCIMSNTLGTVRGHIYLYVLSSPNCDSSQSAIGIGDDGWT
TVGIVIIVVVCCVVGTSLIWVIVIYHMRRKSEDYSITNTEEVNLPPDIPSYLSSQGTLSE
PQEGYSNSEAGSNQQLMPPSNSYLHKGADGGTEPLVICSDCYDNANIYSRNREYCPYTYN
TEDDPLDQSLSSLMVQMSKEPYPGCPQHETTTINSLSDGQDRPVFASSQDRLHERKPCSQ
SCGSDLFQQSLWGINNDLGLLHPHCSSPSKTHEVPEVLRNEGISEKEPEQIIPPRLHHRL
HQYNFDFNRTQDMQEHREAT
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgctggtagcgctgctgcgggaggctgcgggggaaccttgcgccgccgccgcgccttgt
tcttgccggcgaggtgtgttggattgcagccgcctccgcctgtccggtcggagcttagaa
ccaggcctgctaccacctttgcctcgcagcatcaccgcgctagatttgagtcataataat
ttgttatcctctaattggagtattgattcatcgggtcaaatgctgcaagaagtgaagatg
aatcacaatgaactaagtggcattccccactttggtgaactaacttctaatatcacacta
ctatcattagtgcataattcaattcaggagattgtctctgaacagctgcagccttatttc
tccctggagaaccttgatctcagctccaacttcatcacagaaatcaaagtttcttcattc
ccacatatgcagctgaagtacctgaatttgagcaacaatagaataactactctggaagca
ggctgttttgataatctgtccaattccttaatagttctaaaactgaacagaaacaaaata
agcatgattccactgaagactttgaaactaccctatgtgcagttcttggaacttaaaaga
aacagaattaaggtaatagaaagccttaccttccaaggcttggactcattgaaatcatta
aaaatgcaacgcaatggaattaataatctgatggatggtgccttttttggactgaataat
atggaagaattagagttggaacagaataatctgacagaagtaaataagggatggctatat
ggcttaaaggccctgcaaaagctctacgtcagtcagaatgccattaacaggattggaccc
gatgcatgggaattctgccaaagtctttctgaactagatctgtcatacaatcaactgact
cgcctagatgactttgcttttattggagtgaatgtattggaaaaattaaatctgagtgac
aataggctcagttacattgctgatggggtttttaaaggactctcatatctacagatttta
gatctacggaataatgagatctcctgggccatagaagatgcaaatgaagcatttacaggt
cttgagagacttaataaattgattcttcaaggaaaccaaattaagtcaattacaaagaaa
gcactttctgatcttcaggcccttgaatatctagatctgaccaacaatgctatagtatct
attgaagaaggtggtttttcccaacctcttcttaaagaattgttgttgaacactagcagc
ttattgtgtgactgccagttgaaatggctcccacgctggcttttccacagccgtttgcag
gacactgtcaatgtcgtttgtgctcatcctgaatggctagctggaaggagtattctcagt
gtgaacactgaagactttgtttgtgatgactttcccaagccacagattagaatacatcct
gagactacagttgcgcttagaggagtcaatgttaccctgacttgcaaggctgtgagcagc
agtgatttgcctatatctgctgcctggagaaaggacagtgaaatattatatgatgcagat
atagaaaattatgtgaggtaccaacaacaagatggtgaaatcctggaatatacttctatc
ctgcatgttttcaatgtgaactttactgatgaaggaaaataccagtgtatcatcttcaat
cactttgggtccaattattccaacaaggccaagttgactatcaatgagctgcctactttt
gtgaaaactcccatggatttgacagtacgtacgagagccatggctaaattggaatgtgct
gcagaaggtcatccaccaccccagatatcctggcaaaaagatggcggcacagatttccct
gcagctcgtgaaaggcgaatgcatgtgatgcccgaggatgatgtcttcttcatagtaaat
gtgaaaattgaagatatggggatttatagttgtatggcacaaaatgtggctggcagtata
tcagcaaatgtaacattgactgtgttagaaacaccttcatttgttaggcctctggaagac
aggaccgtagctcaaggtgaaacagcggttctgcagtgcattgccagtggcagccctgcc
cctcgcctaaactggaccaaagatgatggctctctgacagtgacagaacggcatttcttt
gcagctgccaatcaactgcttatcattgtagatgcgggattagaagatgctggaaaatat
acttgcattatgtctaatacacttgggacagtgcgtggacacatttatctatatgtatta
tcttcaccaaactgtgactcctcccaaagtgccattggaattggagacgatggctggaca
acagttgggattgtgatcattgttgtggtctgctgtgttgtaggcacctctctcatttgg
gttattgttatctatcacatgagaagaaaaagtgaagattatagcatcactaacacagaa
gaggtaaatttgcctcctgatattcctagctacttatcttctcaagggactctgtcagag
ccacaggaaggctacagtaattctgaagcaggaagcaatcagcaacttatgcctccctcc
aatagttacctacacaaaggcgcagatggtggcacagagccattggtgatctgctcagat
tgttacgacaatgccaacatctattccagaaacagggaatattgtccttatacatacaac
acggaagatgatccactggatcaatcattgtccagcttaatggtacagatgtctaaagag
ccctatcctggatgccctcagcatgaaaccacaactattaatagcctttcagatggccaa
gataggccagtgtttgctagcagtcaagacaggctacatgagaggaaaccatgttctcag
tcctgtggtagtgatctttttcaacagtctttatggggtatcaataatgatcttgggttg
ttgcaccctcattgttcatctccatccaagacccatgaggttccagaagttctgcgaaat
gaaggcatttcagagaaagagccagagcagattattcctcctaggcttcatcacagatta
catcaatacaactttgattttaacaggactcaggacatgcaagaacatcgtgaagctaca
taa
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