Thamnophis sirtalis (common garter snake): 106538281
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Entry
106538281 CDS
T06107
Symbol
IFT52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106538281 (IFT52)
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
106538281 (IFT52)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
Motif
Other DBs
NCBI-GeneID:
106538281
NCBI-ProteinID:
XP_013908204
UniProt:
A0A6I9WZ18
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MEGDLRNIIIFNASKKEIFTMNSGYRILQKKLRSNWKIQSLKDEITSEKLSGVKLWITAG
PREKFTAAEFEVLKKYLESGGNILVMLGEGGESRYDTNINFLLEEFGIMVNNDSVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKTVTGIIDEDTGGNDSQALTFVYPFGATLNVMKPA
VAVLSTGSVCFPLNRPILAFYPYKTQGGKLAVLGSCHMFSDQYLEKEENTKIMEVLFQWL
TTNDIHLNQIDAEDPEISDYTMLPDIATLSERLRVCLQEGDENPRDFTTLFDMSIYQLDT
TALPKIIKSYEQLNVKYEPLQLIQPQFETPLPALQPAVFPPAFRELPPPSLDLFDLDETF
SSEKARLAQITNKCTEDDLEFYVRKCGDILGVTNKLPKEQQDAKHILEHIFFQVVEFKKL
NQENDIDTSEVGFQGGF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggagggagatcttcggaatattattatcttcaatgcttccaaaaaagaaatttttact
atgaacagtggttataggattttacaaaaaaaacttcgtagtaactggaagatacagagc
ttaaaagatgaaatcacttcagagaaactttcaggagtaaaactgtggattactgcagga
cccagagaaaagtttacagctgctgaatttgaagttctgaagaaatatctagaaagtggt
gggaatatcttggtgatgctgggagaaggtggtgaatctcgttacgatactaacatcaac
ttcttattagaagagttcgggatcatggtcaataatgattctgtggtgagaaatgtgtat
tataaatatttccatcctaaagaagcgttggtgtctaatggagttttaaatcgggaaatc
agcagagctgcaggaaaaaccgtgactgggataatagatgaagatactggtggaaatgat
tcacaggctctcacttttgtatatccgtttggtgctacattaaatgtgatgaaacctgca
gtggctgttttgtctacaggctctgtctgttttcctcttaatagacccattttggctttt
tatccttacaagactcaaggtggcaaattagcagtattgggatcatgtcatatgttcagt
gatcagtatttggaaaaagaagaaaataccaaaatcatggaagtacttttccagtggctt
acaacaaatgacattcacttaaatcagatagatgcagaagatccagaaatttctgattat
acaatgcttcctgatatagccactttgtcagaacgtttacgagtttgtctgcaagaggga
gatgagaatccacgagactttacaacactgtttgatatgtctatttaccaactagatact
acagcacttccgaaaattattaagtcttatgaacagctgaatgtgaaatatgaaccactt
cagctaattcagccacagtttgaaacacctttacctgcactccagccagcagtttttcca
ccagctttcagagagttgcctcctcccagcctggatttgtttgatttggatgaaactttt
tcttctgagaaagctcgtctcgcccaaataacaaacaagtgtactgaagatgatctggaa
ttctatgtcagaaaatgtggcgatatcctaggggtaacaaataaactgccaaaggaacag
caagatgccaagcatatactggagcatattttctttcaagtggtggagttcaagaagcta
aatcaagaaaatgatattgatacaagtgaagttggattccagggtggtttctga
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