Thamnophis sirtalis (common garter snake): 106538311
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Entry
106538311 CDS
T06107
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106538311 (AP5B1)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
106538311 (AP5B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
106538311
NCBI-ProteinID:
XP_013908235
UniProt:
A0A6I9XU32
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGSKGGESWTATVEAFRVSPTAFLLSHPAGDTLAADLLNELRSEKLGEAIKLSILSLFLE
YPTLLCPDAKKGREAAASLLSLFAQLSLSPKHVGLRCSLLFAAETVLVATDSLGEDCPTS
HELLSVLLHLVSDPNDSRGGVAERPIRAAACECLRELESCYSGFLLHRLEILRSLQQQEA
SSVHQGYTLLYSLVLRNAIFLLARNGQGCLGDLLASNGALVWEATKEIGKFSPAALDQLV
LLPSAADLKELKLVLSALLESSYLLTSAAQSHLLCHLAQAVSVVRTQSPAIFKAQLARLF
GTASVTLEHAILQLKSLFTDSLFTAEDESFLLRHLVGLAQHPALPEAVKLFHLDCLLHFP
ENRPLVSGTDERLPVLLTPRTTSGLFPGFFQDQGTVLARMNLLCLVCVENEGPSAERGGG
YLLEHVLALGSLVARGGGLDATRLFFQAAFIFAQYFGSQAQPMAELTQCLLDLYRHNCTL
VPNIINLLDKTWKMLDESSWARTLARALQEFVVSIPLQEEDLSWHLKILARLAKEKEVPQ
GSTMHFLARLVASGKLGDWRSGQILLSVCRNLMVLHPSPALSKLAALLHAISQSHTDVDV
QDRASFYYTLLTNLSSEKLRSVLVHEGPVKTRSLSSSIVADSESFVAALTVHSVDPAPLK
LQCVEITGDTPTAPPAEQEVDSYCQWLLADRSPSRLSLTYQLVHAGPGTPPYDLLLCVVL
RFTCTSRHYDPVPELCIPCLSAHRPSPTVRLTLRPHCPYPTQLNVSALYTTQDGLTRWSR
LENLDVAFPDLFLPLPVPAWSPEKRSQLFDVLWELLRPDAKDAHAESLTVWPLPPRCLES
LVCDQFGRYILAEEGDEYRIALTLPPRDHILLKVRSVDDAARVSIRTDNWKLLPSLNHYL
QSLVQGS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaaaggcggagagagctggaccgctaccgttgaggctttccgggtgtccccc
accgctttcctcttatcccacccggccggagacaccttggccgctgacttgttgaatgaa
ttgcggagcgaaaaactgggggaagccatcaagctttcgatcctgtctttattcttggaa
tatcccaccctgctctgccccgatgccaagaagggtcgggaagccgcggcctccctcctt
tccctctttgcccagctgagcctctcccccaagcacgtcggcctccgttgctccctgctc
ttcgccgcagaaacggtgctggtggcgaccgacagcctgggcgaagactgcccgacgtca
cacgaactgctgtccgtactgctccacctggtgtctgacccgaacgacagccggggggga
gtcgccgagcggcctatccgcgcggcggcttgcgagtgccttcgagaactcgagagctgc
tactcgggattcctgttacaccgactggagatcctgcggtctctgcaacagcaggaggcc
tccagcgtccaccagggttacaccctgttgtacagcttggtgctgcggaacgccatcttc
ctcctggcccggaatggacaagggtgcctgggggaccttctggcaagcaacggggcgctg
gtgtgggaggctacgaaggaaatcggcaagttctcgccggcggccctcgaccagctggtg
ctcttaccatctgcggcggacctcaaggaactaaaattggtgctctcggcgcttctggag
agcagctatctcttaacctccgcagcacagagccacctcttgtgccacctggctcaggcg
gtgagcgtcgtgcgcactcagtccccggcaattttcaaagcccagctggcgcgtctcttt
ggcacagccagcgtgactctggaacacgccatcctacagctgaaatcgctgttcaccgat
agtctattcaccgctgaggacgagtctttcctcttgcggcatctggtgggactggcgcag
cacccggctctcccggaggccgtgaagcttttccacttggattgtcttttgcacttcccc
gaaaaccggccgctggtctcgggaactgacgagcggctgccggttctgctcacgccgcgc
actacctcgggcctcttccccgggttcttccaagatcaggggaccgtcctggcccggatg
aatttgctgtgcctcgtgtgcgtggagaacgaggggcccagtgccgaacgtgggggtggt
tatctcctggagcacgtcctggcccttggaagcctagtggcccgaggcggaggattggat
gccacacgacttttcttccaagctgccttcatttttgcccaatattttggctcgcaggcc
caacccatggcggaactcacgcagtgcctgctggatctctaccgtcacaactgcacctta
gtcccgaacatcatcaatctgttggacaaaacatggaagatgctggacgagtccagctgg
gccaggacgctcgcccgggccctgcaagaatttgtcgtgagcatccccttgcaagaggaa
gacctaagttggcatctcaagattttggcccggctggcgaaggagaaagaagtgccccaa
gggagcaccatgcacttcttagctcgtctggtcgcctcggggaaactcggggattggcgc
tcgggccagatccttctcagcgtttgccggaatctgatggtccttcacccctcgcctgcg
ctgtccaagctggcggccctcctgcatgccatctcccagagccacacagatgtggatgtc
caagaccgggctagcttttattacaccctactcaccaacctgtccagtgaaaaattaaga
tccgtgctggtccacgaaggtcctgtcaagactcggtcgctatcctcgtccattgttgcc
gacagtgagagctttgtcgccgcattgacggtccactcggtggatccggctcccttgaag
ctccagtgtgttgagattacaggggataccccgacagctcctccggctgagcaggaggtg
gacagctactgccagtggttgctggccgaccgctctccctcacggctcagtttgacatac
cagctggtccatgcggggcctggcacgccaccctacgacctcctcctctgcgtggtgctt
cgcttcacctgcaccagccggcattacgatccggtgcctgagctctgcattccgtgcctt
tctgcacatcgcccgtccccgacggtgaggctgacactacggccgcattgcccgtacccg
acacaactgaacgtttctgccctttatacgacgcaagacgggttgacgcgttggagtcgg
ctcgaaaacctggacgtcgcctttccagaccttttcctacccctgccggtccccgcctgg
tctccggagaaacgtagccaactttttgatgtgctctgggagctcctgcggcccgacgcc
aaagacgcgcacgccgagagcctcaccgtttggcccctgccgccccgatgcttagaaagc
ttagtgtgtgaccaatttggcaggtatatcctagctgaggaaggagatgagtataggatc
gccctgactttaccgcctcgggatcacatcctgctgaaagtgcggagtgtagatgatgcg
gcccgggtgagcatccgcaccgacaactggaagctgcttccctcgcttaatcactatttg
cagagtctggtgcagggcagctga
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