Thamnophis sirtalis (common garter snake): 106538337
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Entry
106538337 CDS
T06107
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106538337 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106538337 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106538337 (VPS36)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
106538337 (VPS36)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106538337 (VPS36)
Exosomal proteins of colorectal cancer cells
106538337 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
NAI2_C
Xre-like-HTH
DUF5847
Motif
Other DBs
NCBI-GeneID:
106538337
NCBI-ProteinID:
XP_013908270
UniProt:
A0A6I9XU77
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MAVPLSQIIFIEEQAAGIGKSAKIVVHLHPVGSNKDPGPFQTSKYSYVKLSFKEHGQIEF
FRRLTEEMSQRRWENMPASQTIDVDKASQGGRIRAAGIVGIERKLEERRKEMDKNISEAF
EDLSKLMEKAKEMVELSKSIASKIREKQGDITEDETIRFKSYLLSMGIANPVTRETHGSG
THYHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLK
LPLRLRIFDSGVMVIELLSHNEEEMVASALETVSEKGSLTAEEFAKLVGMSVLLAKERLL
LAEKMGQLCRDDSVEGLRFYPNLFLTQS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctctttcccaaattatcttcattgaagagcaagcagcggggataggaaaa
agtgccaaaatagttgtacatcttcatccagtaggttccaataaggatcctggtccattc
cagactagtaaatactcatatgtcaagctttctttcaaagaacatggccagattgagttc
ttcaggaggcttacggaagaaatgtctcagcgcagatgggagaacatgccagcttctcaa
accatagatgttgataaggcttcacagggtggaagaataagagctgctggaattgttggc
attgagaggaaactagaagaaagaagaaaagagatggataaaaatatttctgaggctttt
gaagacctcagcaagctgatggaaaaggcaaaggaaatggtggaattgtccaaatcaatt
gctagcaagattagagaaaagcagggtgacatcactgaagatgagacaataagattcaaa
tcctacttgttgagcatgggcattgccaatccagttacccgggaaacccatggatctggc
actcattaccatatgcaactggcaaaacaattagctggaattttacaggcacctttagag
gaacggggaggaataatgtccctcacagaagtttattgtctggtgaatcgtgctcgtggc
ctagagttgctttcccctgaagatctagtaaatgcttgtaagatgttggaatcactaaag
ttacctctaaggttacgtatattcgacagtggcgttatggtaattgaactcctatcacat
aacgaagaagaaatggtggcttctgctttagagacagtttctgagaagggatctcttacc
gctgaagagtttgcaaagcttgtaggaatgtctgtgcttttagccaaagaaaggttgctg
ttagctgaaaagatgggtcagctttgcagagatgattctgtagaaggcttgcgattctat
ccaaatttatttcttacccaaagttga
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integrated database retrieval system
