Thamnophis sirtalis (common garter snake): 106538593
Help
Entry
106538593 CDS
T06107
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106538593 (TRPA1)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106538593 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106538593
NCBI-ProteinID:
XP_013908594
UniProt:
A0A6I9X033
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MPKVISDGNTCRLRSFIKKNREGLKKLDQLNATPLHHAAGKGQLELMQMIMDDSSFEVLN
VTDSCGNTPLHWATKKQQTESVKLLLRRGANPNILNSNMISPLHWAVLYLLNDLVKIFLE
CSTTDVNLEGEGGNTPILVACYKDNPEALKLLIENGGDIAKANNMGCMPVHAAAFSGSKL
CLEIIIKRVLTDFSLQGANINTVDVEGRTPLLLATSCASWKTVNLLLSKGANVELKDLLG
RNFLHLTVLQPGGLQHLNEHYLKMKHIKDLITEEDQEGCTPLHYACKQGVPLSVNILLEM
NVSIYSKSRDKKSPLHFAASYGRINTCFRLLEAMQDTRLLNEGDKKGMTPLHLASQNGHE
KVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILNTNMKVTDKVNDEGNTALHLA
AREGHAKAVKLLLDDNAKILLNRAEASFLHEAIHNGRKDVVNAVILHKRWEESITTFSHH
SINKCAILEMVEYLPECLKLVLDNCIIESPEEKGSKDFNIEYNFRYLQCPLKLKKKFKES
GGIIYEPLLALNAMVRHNRVELLSHPVCTEYLLMKWMAYGFRAHILNLAVYSLGLIPLTL
LITNLEPDVSFNATLKYGPFDNKDSNFIKVCMSFVFIMSLFGICKEIIQLFQQKLNYLLD
YSNLLDWTIYTTSIIFVSSLFVTLPIRLQWDCGAIAILLAWTNFLLYLQRFENYGIYIVM
FWEILRTLIRIVIVFFFLMLAFGLSFYVLLGSQQTYGTPYLSVMQTFSMMIGDNNYREAF
LEPMLADKLPFPFLSFIILLIFSMLIPILLMNLLIGLAVGDIAEVQRFAAMKRIAMQVDL
HTNLEKKLPYWFLSRVDQESIVVYPNRPRYCGFMSVFHYCFGWDNTAADTQSADTTLELE
VLKQKYRLKDIGTLVEKQHNLLKLVAHKMEIMSEVEDEDPNDLFQNKFRKEQLEHKNSKW
DTVLKAVKSKCA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagtgatctcagatggaaatacttgcagacttcgaagtttcattaagaagaat
cgtgaaggacttaaaaaactggatcagctgaatgctacaccattgcatcatgctgccgga
aagggtcaacttgagttaatgcaaatgatcatggatgattcttcatttgaagttctaaat
gtaacagactcgtgtggaaatacaccactgcactgggctacaaaaaaacaacagactgaa
agtgttaaattacttctcagaagaggggccaacccaaacatccttaattccaatatgatt
tctccacttcactgggctgtgttgtatcttttaaatgatttagttaagattttccttgaa
tgcagcactacggatgtaaatctggaaggagagggtgggaatacaccaatattagtagca
tgttacaaagataatcctgaagcactgaaacttctgattgaaaatggcggtgacattgct
aaagcgaacaatatgggctgtatgccagtccatgcagctgccttttctggttcgaaatta
tgtttggagattattataaagcgagttttgacggacttttcattacagggagcaaatatt
aatactgttgacgttgagggtcgaacaccattactactggccacttcttgtgcatcatgg
aaaactgtaaatcttttactttcaaaaggagcaaatgtagaattaaaagatctccttggt
cgtaattttttacatttaactgtcctacaacctggtgggttacagcacctgaatgaacac
tatttgaagatgaaacatattaaagatcttataactgaggaggatcaggaaggatgcact
cctttacattatgcatgcaagcaaggtgtacccctttctgtgaatatccttcttgaaatg
aatgtttctatatactctaaaagcagagacaagaaatctcccttacattttgcagctagc
tatggacgaatcaacacctgttttagacttctggaggctatgcaagataccaggctcttg
aatgaaggagacaaaaaaggcatgacacctttacatctggcttctcaaaatggacatgaa
aaggtagtccagtttctcctaaagaaaggcgccctctttctttgtgattataaaggctgg
acagctttgcatcatgccgcttttggtggatatactcgcacaatgcagattattttgaat
accaatatgaaagtcaccgataaagtaaatgacgaagggaatacagctcttcaccttgct
gccagagaaggccacgcaaaagcagtgaaattacttcttgatgacaatgccaaaattctc
ctgaacagagctgaagcttctttccttcatgaagccatacacaatggccgaaaagatgtt
gtaaatgctgtcattttacataaaagatgggaagaatctataacaacattttctcaccat
tctataaacaaatgtgcaatactagagatggttgaatatcttcccgaatgtttaaaattg
gttttagacaattgcattattgaatcacctgaagaaaaaggatccaaagacttcaatatt
gaatataacttcagatatcttcagtgtccgctgaaacttaagaagaaatttaaagagagt
ggaggaataatttatgagccacttcttgctttaaatgccatggtacgtcacaatcgtgtt
gaactgcttagtcatcctgtttgtacagaatatttacttatgaaatggatggcctatggt
ttccgagcacatattttgaatctggctgtgtactcccttggcttaatacctcttactctc
ctgatcaccaatttagagccagatgtatctttcaatgcaacacttaaatatggacctttt
gataataaggattcaaacttcattaaagtttgcatgtctttcgtttttatcatgagttta
tttggtatctgcaaagaaataatacagctattccaacagaaattaaactacttgttggat
tattctaatcttcttgactggacaatttatactacaagtatcatttttgtgtcatcttta
tttgtgacgttaccaatccgtttacagtgggattgtggtgcaattgctatactcttggct
tggacaaacttcttgctctatttgcaaagatttgaaaattatggaatatatattgtgatg
ttttgggaaattttgaggactctgatacggatcgttattgttttcttttttttgatgtta
gcttttgggctcagcttctatgttcttcttggttcacagcaaacatatggcacaccatat
ctttcagtaatgcaaacattttccatgatgatcggagataacaactaccgtgaggctttc
cttgaaccaatgctggctgataaacttccttttccattcctgagttttatcattctcctt
atcttttctatgcttatccctattcttcttatgaacttactgattggtttggctgttggt
gacattgcagaggtgcaaaggtttgctgcaatgaaaagaatagcaatgcaggttgatctt
catacaaacctagaaaaaaaactaccatattggtttctcagtagagttgatcaagaatcc
attgttgtgtatcccaatagacctagatattgtgggtttatgagtgtgttccactattgc
tttggatgggataatacagcagctgatacacagagtgctgacacaacattagaacttgaa
gtattgaaacagaagtacaggcttaaggacattggaactctggtggaaaaacagcacaat
ctccttaaactagttgcacataagatggaaataatgtctgaggtagaggatgaagatcca
aatgatttattccagaacaaatttaggaaagagcagttggaacataagaacagtaaatgg
gatacagtgctcaaagcagtgaaatcgaaatgtgcctaa
DBGET
integrated database retrieval system
