Thamnophis sirtalis (common garter snake): 106538653
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Entry
106538653 CDS
T06107
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106538653 (RNF130)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106538653 (RNF130)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106538653 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
SP24
PspB
Prok-RING_4
CrgA
zf-RING_16
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
106538653
NCBI-ProteinID:
XP_013908694
UniProt:
A0A6I9X0C9
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MILNWILPYWSYLSSVPILVLFNCYPLQASADNSNLIYYTALINVTVLNPDRSTSASITL
ERARYGQTSPKIGVKGLLLAPLPINGVPDRLGCDPRTRFQVPPNTKQWIALLQRGNCTFK
QKILRAASHNASAVVIYNNVSGNEPVTMTHQGTGDIVTVMITEMKVKEILNYLEKNMSVL
IAIAVGTRHPSKNVNRSSLVFVSVSFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGD
AAKKAVGKLTARTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKTCVDPWLS
EHCTCPMCKLNILKALGIVTNVPCADNMAFDMERLTRGQLGNRGSVPGDLSSDSSLTLEP
LRISGISQFPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNANEA
EWY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgattctgaattggattttgccttactggagctacttatcctctgtgcccattttggtc
ctgtttaactgttacccactccaagctagtgcagataattccaatctaatatattataca
gctctcataaatgtcactgtgttgaatcctgatcgttcaacatctgcttcaataacgctt
gaacgtgcacgctatgggcaaacttctcccaaaataggtgtcaaaggcctacttctggca
cctttgccaatcaatggagttccagatcgtttaggatgtgacccacgaacacggtttcaa
gttcctccaaatacaaagcagtggattgctctattgcagcgaggaaattgtacatttaaa
caaaaaattctgcgagcggcttcacataatgcttcagctgtggtaatttacaacaatgta
tctggcaatgagcctgttaccatgactcatcaaggaactggagacattgttacggtcatg
atcactgaaatgaaggttaaagaaatcttgaattatttagaaaaaaatatgtcggtccta
attgcaatagccgtgggaacacgccatccaagcaaaaacgttaatcgaagttcccttgtc
tttgtatccgtatcatttatagttttgatgataatttcttcagcatggctaatattttat
ttcattcagaagatcagatataccagtgcacgtgatcgaaaccagcgtcgtcttggagat
gctgccaaaaaagctgttggtaaactgacagcaagaactgtaaagaaaggtgataaggaa
acagatccagactttgatcactgtgctgtttgcattgaaagctataagcagaatgatgtt
gtacgcattctaccatgcaagcatgtttttcataaaacctgtgtagacccatggctaagt
gagcactgtacctgtcctatgtgtaaactgaatattttgaaggccttgggaattgtgaca
aatgtaccatgtgctgacaatatggcctttgacatggaaagactaaccagaggccagcta
ggtaacaggggatcagtacctggtgaccttagcagtgacagctcactcactcttgagccc
ctacgtatttctggtatatcacaatttccgcaggatggagagctgactccaaggacaggc
gagatcaacattgctgtaactaaagaatggtttattattgccagctttggcctcctaagt
gccctgacactctgctacatgatcatcaaagccactgcaagcttaaatgctaatgaagct
gaatggtattga
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integrated database retrieval system
