Thamnophis sirtalis (common garter snake): 106538748
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Entry
106538748 CDS
T06107
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106538748 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106538748 (COPB2)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106538748 (COPB2)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106538748 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
WD40_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
106538748
NCBI-ProteinID:
XP_013908826
UniProt:
A0A6I9X3E4
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIKVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWACSQVFEGHTHYVMQIVINPKDNNQFASTSLDRTIKVWQLGSSSPNFT
LEGHEKGVNSIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQILEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSSVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYISEKVATAQDTHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
ALEAESEQKWKQLAELAINKCQFSLAQECLHHAQDYGGLLLLATASGNTSMVNKLAEAAE
KDGKNNVAFMSYFLQGELDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYIKNSQTTSRPASEYPLVTPNEERNILEEAK
DFTLQNKISEEPEDESVPSPRPVITPPVAGKISLDIKDEKVLLDLDVDLDNLELEDIDTT
DIFLDEEMSD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgacttgatataaagcggaaactaacagctcgatctgaccgagtgaagagt
gtggacttgcatcccacagaaccatggatgttggctagcctttacaatggcagtgtttgt
gtttggaaccatgaaacacaaacactggtgaagacttttgaagtatgcgatttacctgtc
agagcagctaaatttgtggcaagaaagaactgggttgttacaggagctgatgatatgcaa
attaaagttttcaactataatactttggaaagggtacatatgtttgaagcacattcagat
tatatccgttgcattgctgtgcatcctacgcagcctttcattctaacaagcagtgatgat
atgcttattaaactatgggactgggataaaaagtgggcctgttctcaagtgtttgaaggg
catactcattatgtaatgcagattgtcataaatcccaaggataataaccagtttgctagt
acatctctggatagaacaatcaaggtgtggcagcttggctcttcatcacccaactttact
ttggaagggcacgaaaaaggtgtaaatagtattgattattacagtggaggtgataagcct
tacctaatttcaggagcagatgatcgtcttgttaaaatctgggattatcagaataaaacg
tgtgtgcaaattctagagggacatgcacagaatgtttcttgtgtcagttttcaccctgaa
cttcctattatcatcactggctctgaagatggaactgttcgcatctggcattcaagcact
tatcgtctggaaagtactttgaattatggcatggaacgcgtttggtgtgttgcaagccta
agaggatcaaacaatgtggcccttggatatgatgagggtagcatcattgtcaaacttggt
cgggaagagccagccatgtcaatggatgcaaatggaaagattatttgggccaagcattca
gaaattcagcaagctaatctcaaagcaatgggagatacagaaatcaaagatggggagagg
ctaccgcttgctgtgaaagatatgggcagctgtgaaatatatcctcaaactattcagcat
aatcccaatgggcggtttgtagtagtatgtggggatggtgaatatatcatttatactgct
atggcactgagaaacaagagctttggctctgctcaggagtttgcatgggcacatgattct
tctgagtatgcaatcagagaaagcaacagcagtgtcaagatatttaaaaacttcaaagag
aagaaatcctttaaacctgattttggggcagaaggtatctatggtggtttcttattgggt
gtccgatctgtcaatggcctggctttttatgactgggaaaatacagaactgatacgcaga
attgaaatacaacccaaacatattttttggtctgactctggtgaactagtctgcattgct
acagaagaatcattcttcattctgaaatatatttctgaaaaagttgcaaccgcacaagat
acacatgagggagtcactgaagatggcattgaagatgcctttgaggtacttggagaaatt
caagagattgtgaaaacaggactttgggtgggagattgttttatttatacaagctctgtg
aacagactaaactactatgttggaggagaaattgtcactattgcacacttggaccgaaca
atgtatttattagggtatatccccaaagacaacagactttaccttggtgacaaagaatta
aatatagtgagttattccttattagtctcagtgctagaatatcaaactgcagtcatgagg
agagacttcagtatggcagacaaagttcttcctacaattccaaaggaacagaggaccaga
gttgcacacttccttgagaagcagggtttcaaacagcaagcacttgccgtatcaacagat
cctgaacatcgttttgagcttgctcttcagcttggtgagcttaagattgcatatcaactt
gcattggaagcagagtctgaacagaagtggaagcagctagctgaacttgctatcaataag
tgccaatttagccttgcccaagaatgtctgcatcatgcacaagactatggtggcttattg
cttttagccacagcttcaggaaatactagtatggtaaacaagttagctgaagcagcagaa
aaagatggcaagaacaatgtagcatttatgagctactttctacaaggagagcttgacagt
tgtcttgaacttttgattaaaactggacgattaccagaagcagctttcttagcacgaaca
tatttgccaagtcaagtttcaagggttgtaaaactatggagagaaaatctttctaaagtc
aatcagaaagctgctgaatccctagcggatcccacagagtatgaaaatttgttccctgga
ttgaaggaagcatttgttgctgaagaatacataaaaaattcccaaactacatcgcggcca
gccagtgaataccctctcgttactccaaatgaagaaagaaatatcttggaagaagccaaa
gatttcacactgcaaaacaaaatatcagaggaaccagaagatgaatcagttccatctcct
aggcctgtaataacacctccagttgctggaaaaatttcacttgacatcaaagatgaaaag
gttttactggacctagatgtagatctggataacttggaattggaggatattgataccacc
gatatttttctggatgaagaaatgtctgactga
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integrated database retrieval system
