Thamnophis sirtalis (common garter snake): 106538974
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Entry
106538974 CDS
T06107
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04020
Calcium signaling pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106538974
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106538974
04082 Neuroactive ligand signaling
106538974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106538974
Ion channels [BR:
tsr04040
]
Ligand-gated channels
Glutamate (ionotropic)
106538974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106538974
NCBI-ProteinID:
XP_013909118
UniProt:
A0A6I9XD82
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MSQNTRYRVAEADLVDEPGSAFLQLGVSIEQQIQVIFKVLEEYDWSSFAVITSLYPGYSI
FLDVIRSFTDTSYFGWEIQDVLTFEMSQETSISKLQKLLRQIDAQVMIVYCSRDEAEFLF
QVVEQAGLIGPGYVWIVPSLTVGNMDVPPTSFPIGLISVTTESWKMNLRQKVRDGVAIIA
IGAESYFKAHGYLPIVGRDCNSKSPSSAPTNTFYRHLLNVTWENRDLSFNKGGYLVRPTM
VVISLNRHRLWEMVGKWEKGIIRMEYPVWPRYGSFLQPMSDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSVSGSEPMDPYTKLCCKGFCIDILKKLAKTVKFSYDLYL
VTNGKHGKIVDGFWNGMIGEVYYKRADMAIGSLTINEERSQIIDFSVPFVETGISVMVAR
SNGTVSPSAFLESGGPSFTIGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIF
LASYTANLAAFMIQEQYIDTVSGLSDRKFQKPQEQYPPFRFGTVPNGSTERNIRSNYHDM
HSHMVKYNQRSVEDALVSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGY
GIALQKDSKWKRTIDLALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVF
YMLLVAMGLSLFVFAWEHLVFWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQNLESPVRV
YKPDVTANSAQANVLKMLQAAKNMVSTASVGNSLENATRTIENWSSRSENFQTTFSLRTP
QFVIQNTSGSNRPAHSSNTTTAEKLGRNLPPLLLAPQQTVGPASESCGETIEHSPILHPL
KLQGNCSEDKIIPGFAVYHSPQYLLTTSQANLRKHIGSPLSDAPHSPIRALQELSPHNHK
LPVSRGHGGKKIHQNDHLYKEGEHSSATQESRLGFSSDKKKNLEVHYLPHPCIYNSFPKD
NRTCRPFAHKEYDPLELGREKETYTASLSRSTLEQHEQFHSLGIWRHPPKSSSSRDVLDF
FPEASLIPKAKLLPGIHHGVHHHSPDALRPSNACNRKCMQANGISWKEKQLLHSQSMRLP
SYREACLQNISGIHRASSAVVQKQYAYVNSYPNLPIYWRSFRPGSPHLCEQSCASQHCFS
QASWPSCSRDFLVHEDKQRAMYFDSTQRDCRNQSRVYPTFIQMGNTERRNTSTTLRMHSP
CTTRSWRRISSLESEV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatactcgatacagggttgctgaagcagacctagtagatgagcctggctct
gcctttctacagttgggtgtctcaattgaacaacagatacaagtgatcttcaaagtcttg
gaggaatatgactggagctccttcgctgttatcaccagcctctatccgggatatagcatc
ttcctggatgtaattcgatccttcacagacaccagctattttggctgggagatccaggac
gtcttgacctttgagatgtcccaggagacgagcatctccaaactgcagaagctgctccgc
cagatagacgctcaagtcatgatcgtctattgttcacgagatgaagcagagttcctcttc
caggtggttgagcaggccggtttaatcggccctggctacgtctggattgtgcctagtcta
acagtggggaatatggatgtgccacctacctcatttcctattggcctcatcagtgtgacc
actgaaagctggaaaatgaacctgagacaaaaggttcgggacggagtggctatcattgct
attggagccgagagctatttcaaggcccatggctacctccccatcgtgggcagagactgc
aatagcaaaagcccttccagcgcaccaacaaacactttctataggcatttactcaatgtg
acatgggaaaacagagatctctccttcaacaaaggtggttacttggtgaggcccaccatg
gtagtgatttcgttgaaccggcatcgactctgggagatggtggggaaatgggaaaaggga
attatccgcatggaatatccagtgtggccacgctatggatccttcctgcagcccatgtca
gataatcgccacctcacagtggctacccttgaagaaagaccatttgtcattgtggagaac
acagatccttccactggagtatgtgtccgaaatacagttccttgccggaaacagaccaac
tcctccgtaagtgggagtgaacctatggacccatataccaaactctgctgcaaaggtttt
tgcattgacatcctaaagaaactagccaagactgtgaagttctcctacgatctctacctg
gtgacaaatgggaaacatggtaaaatagtggatggtttctggaatggcatgattggtgag
gtatattacaagcgagcagatatggccattgggtccctcacgatcaatgaggaacgctca
caaattattgatttttctgtaccttttgtggagacgggcattagtgtcatggtagccaga
agcaacgggactgtctcgccttctgcttttctagagtccggtgggccatccttcactatc
ggcaagtccatctggctactctgggctctggttttcaacaattctgttcccattgaaaat
cccaaaggcaccaccagtaaaattatggtcctcatctgggctttctttgcggtcatcttc
ttagctagctacactgcaaacttggcagcattcatgatccaggagcaatatattgatacc
gtctctggactgagtgatagaaagttccaaaaacctcaagagcagtaccctccgttccga
tttggaacagttcccaatggtagtacagagagaaatatccggagcaattaccacgatatg
cattcccacatggtaaaatacaaccagcgctcggtggaagatgccctcgtcagcctgaaa
atgggaaagctggatgcttttatctatgatgccgcagtgctcaattacatggctggcaag
gatgagggttgcaagctggtaaccattggcagtgggaaagtctttgccaccactggctat
ggcattgccctccagaaggactccaagtggaagagaacaattgatttagctctcctgcaa
ttcctgggagatggtgaaacccaaaaactggaaactgtgtggttgtctggtatttgccaa
aatgaaaagaatgaagtgatgagcagtaagctagacattgataacatggcaggggtcttt
tatatgctgctggtggcaatgggactgagcctgtttgtctttgcttgggaacacttggta
ttttggaagttgcggcactccgtgccaaagtcccacaaacttgatttccttctagcgata
agcaggggtatttacagctgttttaatggagtccagaacctggagagtcctgttcgtgtt
tacaaaccagatgtcactgctaactctgctcaagccaatgtgcttaagatgctgcaggca
gccaagaatatggtatcaacagccagtgttgggaattcactggaaaatgctacacgcact
atagagaactggtctagtaggagtgaaaacttccaaacaactttctccttaaggactccc
caatttgtgattcaaaacaccagtggatcaaacaggccagctcattcctccaacactaca
acagctgagaagcttgggaggaaccttccacccttgcttctggcacctcagcaaactgtg
ggaccagccagtgaaagctgcggagagacaattgagcactcaccgatactccatccactg
aaattacaaggcaactgctctgaagataagattattccaggttttgctgtgtaccactct
ccacagtatttgctaaccacatctcaggctaacctcagaaaacacattggaagtcctctt
agtgatgctcctcattccccaatcagggctcttcaggaactttctccgcacaatcataag
ctccccgtgtccagaggccatggggggaaaaaaatccaccagaatgatcacctgtataaa
gaaggggagcatagcagtgcaacccaggagtcaaggctaggtttctcttctgacaagaag
aagaatttggaagttcactatttgcctcatccctgtatatataattccttcccaaaggac
aacagaacttgtagaccctttgcacataaagaatacgacccactagagctggggagagaa
aaggagacatatacagctagcctttcaagatcaaccttggaacagcatgaacagttccat
tctctaggcatctggaggcatccaccaaagtcttccagttccagggatgtcctggacttc
tttcccgaagctagcttgatccccaaagcaaaactgctgcctgggatccatcatggagtc
caccaccattctcctgatgcccttaggccaagcaatgcatgcaataggaaatgtatgcag
gccaatggtataagttggaaggagaaacagctgctacattcgcaatctatgcggctccca
tcctatcgagaggcctgtctacagaacatctcaggcatacacagggcttcttcagctgta
gtgcagaagcaatacgcctatgtgaactcataccctaatttacctatttattggagaagc
tttcgtccaggctctcctcacctatgtgaacaatcctgtgcctcccagcactgtttcagt
caggcatcctggccctcgtgcagcagggatttcttggtccacgaggacaagcagagggcc
atgtactttgatagcacacagagagactgcagaaatcagagcagggtttatccaacgttt
attcagatgggcaacaccgagaggagaaacacatcgacaaccctgaggatgcacagccct
tgcacaacaagatcatggaggcgcatatctagcctagaatctgaagtctga
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integrated database retrieval system
