Thamnophis sirtalis (common garter snake): 106538999
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Entry
106538999 CDS
T06107
Symbol
OTP
Name
(RefSeq) homeobox protein orthopedia
KO
K24901
homeobox protein orthopedia
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106538999 (OTP)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106538999 (OTP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106538999
NCBI-ProteinID:
XP_013909138
UniProt:
A0A6I9XDA1
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All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSEPGGHPGDLAPNSDAVEGATLLPG
EDITTVGSTPSTLSVSSKDPDKQPGPPQNPSQAGPQQGQQKQKRHRTRFTPAQLNELERS
FAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLP
QFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCSLA
AGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVTGSPQLCSSPDSSDV
WRGTSIASLRRKALEHTVSMSFT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctctcacacgccgacctcctggacgcccggctcggaatgaaagacgccgccgagctg
ttgggccaccgggaggcggtgaagtgccgcttgggcgtcggaggttcggagcccggaggc
cacccgggggacctggcgcccaactcggacgcggtggaaggggccacgctgctacccgga
gaggacatcaccacggtgggttcgacgccgagcacgctgtccgtgagctccaaagacccc
gacaagcagcccgggccgccgcagaaccccagccaggccggaccgcagcagggccagcag
aagcaaaaacggcaccggacgcgctttaccccggctcagctcaacgagctggagcgcagc
ttcgccaagacccactacccggacatcttcatgcgagaggagctggctctgcgcatcggc
ctcaccgagtcgcgagtccaggtctggttccagaaccgacgggccaagtggaagaagcgc
aagaagaccaccaacgtgttccgcgcccccggcacgctgctgcccacgcccggcctgccc
cagttcccttccgccgccgccgccgccgcggcagccatgggcgacagcttgtgttccttc
cacgccaacgacacgcgctgggccgcggccgccatgccgggggtgtcgcagctgcccctg
ccgccggccctgggcaggcagcaggccatggcgcagtccctgtcgcagtgcagcctggcg
gcgggccccccacccaactccatgggcttgtccaacagcctggcgggctccaacggcgcc
ggcctgcagtcgcacctctaccagcccgctttccctggcatggtgcccgcttccctgcca
ggccccagcaacgtgacgggctcgccgcagctctgcagctccccggacagcagcgatgtg
tggcggggcacgagcatcgcctccctccgccggaaagcgctggagcacacagtctccatg
agtttcacctaa
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