Thamnophis sirtalis (common garter snake): 106539037
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Entry
106539037 CDS
T06107
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106539037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106539037
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106539037
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106539037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WWE
DTC
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-UDP
WWE_5
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
106539037
NCBI-ProteinID:
XP_013909183
UniProt:
A0A6I9XDF6
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MRAVHRHVFQLDSAPGQGVVWEWQNDEGSWFPYEMNICVYLEQAFSLSSPQVDLGPFGYN
YGIDFVSQTQTNKTTGYQRRIRRNVDSPYPLAAATGPTHSGPTCSCQQCLSNSGTGPITS
RYRHSMVNLPGHSSGTSPKFLTGIQGANRNSGLSASLVGFVPYNKPALSGARSMPRLNMQ
SAGSASQSAAIGGSSSAHPAPKGTSFHPFSLSCPVHDCPMSLVGMMAFLMSVPGFPVHLT
QAPQPARAHRASKKLCSVKGRRRVVTKDSKTRPEEVVKKYLEELKAPPVDEDCIICMEKL
GAPSGYSEVNESKTIQPGSVGRLAKCAHTFHLLCVLAMYTSGNKDGSLQCPSCKAIYGEK
TGTQPNGRMDVHKLPECLPGYENYGSIQITYNINRGIQVSMSSGGIQIFFFTA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtacacagacatgtcttccagcttgattcggcacctggacagggagtggtt
tgggagtggcagaacgatgaaggaagctggtttccatacgagatgaatatttgtgtatat
ttggagcaagcgttctcgctcagtagccctcaggtggatcttgggccctttggttacaat
tatgggattgattttgtatcacagacccagaccaataaaaccactgggtaccagcgaaga
atccgtcggaatgtggactctccgtacccattagccgcagccacagggcctactcacagc
gggcccacctgttcatgccaacagtgcttgtcgaatagtggaactggccccataacctca
cggtatcggcactcgatggtgaatcttcctggacattcatcaggaacaagtcccaaattc
ctcactgggatacagggggccaatagaaactcaggactcagtgcttctctggtgggcttt
gtgccttacaataaaccagccctctctggagcaagatcaatgccaagactgaacatgcag
agtgcagggtcagcatcacaatctgcagccattggtgggtccagctcagcgcacccagca
cccaaaggaaccagtttccaccccttctccctttcctgccctgtgcatgactgtcccatg
tcccttgtaggcatgatggcctttctgatgtcagtccctggatttcctgtgcacctcacc
caagcgcctcagcctgcccgtgcccatagagcctctaaaaaactctgctcagttaaggga
aggaggagagtggtcaccaaagatagcaagaccaggccagaagaggttgtgaagaagtat
ttggaagagctgaaggcacctccagttgacgaggactgcatcatctgtatggagaaactg
ggtgccccttcagggtacagcgaagtcaatgagagcaagacaatccaacctggaagcgtg
gggaggctggccaaatgtgctcacacctttcacttactttgtgtgctggccatgtacacc
agtggcaacaaggatggcagcctacagtgtccctcttgtaaggccatctatggtgagaag
acaggcacacaacccaatggcaggatggatgttcacaaactcccagagtgtctaccaggg
tacgagaactatgggtcaatacagattacatacaatattaacagaggcattcaggtgagt
atgtccagtggtgggattcagatttttttttttactgcc
DBGET
integrated database retrieval system
