Thamnophis sirtalis (common garter snake): 106539059
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Entry
106539059 CDS
T06107
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106539059 (PWP1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
Other 90S particles
106539059 (PWP1)
Pre-60S particles
Other pre-60S particles
106539059 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_RFWD3
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_DCAF12
SdiA-regulated
Beta-prop_IFT140_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106539059
NCBI-ProteinID:
XP_013909211
UniProt:
A0A6I9X4J4
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MSRPVTCVAWVPQGVAKETPDKVQLDKEELKRLITEAKERLQTGDDDDDDESGQEGTSGA
MDDVDGEVASSSPKDEDTDKLDDDELAEYDLDNYDEENAGTEGLGEIFAGLAVYGTNEND
PYITIKDTDQYEKEDFVIKSNDSLVICGRVDKDHCSLEVHVYNHEEDSFYVHHDLILSAY
PLSVEWMNFDPSSNDSAGNYIAVGTMKPVIEIWDLDIVDSLEPVFSLGHKAKLKKKKQKK
NLSKEDHQGHTDAVLDLSWNKNLRSVLASASADHSVILWDMSRGTTAATLSLHTDKVQTL
QFHPFETQTLISGSYDKSAILYDCRSPQDNHRTWRFSGQVERVTWNHFSPHHFLASTEDG
FVYCLDARSHKPVFTMKAHDEEVSGLQLSSQIKGCLVTTSSDKSVKIWDILGNKPSLVYS
RDMKMGSLFCAGCCPDLPFVYVFGGERQGLQLWDISTISAVNDVFGTRQRLAVTTSSSEA
TNSANSSSSCGGAAMES
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcccgtaacttgtgttgcctgggtgccccaaggtgttgccaaggagacgccc
gacaaggtacaacttgacaaggaagaactgaagcgtttaattactgaagctaaagagaga
ttgcagacaggggatgatgatgatgatgatgaaagtggacaagaaggaacctcaggtgcc
atggatgatgttgatggtgaggtagccagctcttctcccaaagatgaggacactgataag
ttagatgatgatgaattggcagaatatgacttggataactatgatgaagaaaatgcaggt
actgagggccttggagaaatctttgcagggcttgcagtatatggaacgaatgaaaatgat
ccatatatcactattaaagatactgatcaatatgagaaagaagactttgtgattaagtca
aatgacagtcttgttatatgtggcagagttgataaggaccactgcagcctagaagtccat
gtttataatcatgaagaagattccttttatgtccatcatgatcttattttatctgcatat
cccttaagcgtggaatggatgaactttgatcctagttccaatgattctgctggaaattat
attgctgttggcacaatgaaacctgttattgaaatatgggatcttgacatagtggactct
ttagagccagttttttcactaggacataaggcgaaattaaagaaaaagaaacaaaagaag
aatttatccaaagaagaccatcaggggcatactgatgcagtgcttgatctttcatggaat
aaaaatctcagatctgtcttggcaagtgcctcagctgaccattctgtaattctctgggac
atgtccaggggcacaacagcagcaacactttctcttcacacagacaaggtgcaaacactg
cagtttcatccatttgaaacacagactctaatttctggctcttatgacaaatcagccatt
ttatatgactgcagaagtccacaggacaatcatagaacctggagatttagtggacaagtt
gaaagagtgacttggaatcatttttcaccccaccacttcttagcaagcacggaagatgga
tttgtatactgtcttgatgctcgttcccataaaccagtcttcacaatgaaagctcatgac
gaagaagtatctggactacagttaagtagccaaatcaaaggatgtcttgtcacaacatct
tctgataaatctgtgaaaatttgggacatcctaggaaacaagccttctttagtctattcc
agagatatgaaaatgggttccctgttttgtgcaggttgctgtccagatctgccatttgtt
tatgtctttggaggagaaaggcagggactacaactctgggatataagcacaatttccgca
gtgaatgatgtttttggaactcgacagaggctagcagttaccacatcaagttctgaagca
actaattctgcaaatagcagtagcagctgtggaggagctgcaatggaatcatga
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integrated database retrieval system
