Thamnophis sirtalis (common garter snake): 106539114
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Entry
106539114 CDS
T06107
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106539114 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106539114 (NUP58)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106539114 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
PSY3
NET2A_C
GAIN_ADGRA3
Nup49_C
Motif
Other DBs
NCBI-GeneID:
106539114
NCBI-ProteinID:
XP_013909274
UniProt:
A0A6I9X1Z2
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MSAGFSFGAGTLASATAAAAGTGGGGGGGGFSFGSTPSSTGGLNFGTLGSTATATSTPSV
GFGTGLFSSKPTTGFTLGGTNTGTATTIAAGLTLGAPVSTTSTTGLSLGFSKPAGSATPF
ALPITSTSSGLALSSALTSAPAAGSSGFTLNLGGTTVPTTTVSTGLSLGGALTGLGGTLF
PNASTATTGLGQNAFGLTLGTAAAPVTTVNEGLGGIDFSSSSDKKSDKTGTRAEDSKALK
DENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQR
NTLNIDKLKLETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILIEQFEVQLQQYRQQ
IEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQYLGYRKI
FLGDAVDVFEARRVEAKKWQTAPRVTTGPTPFSTIPNAAAIAMAATLTQQQQPATGPQPT
LGISFGTPFGSGIGTGLQSSGLGSSGLGGFAGSAGFGSSAPGAPSFGFGAANKPSGSLSA
GFGNSTTSGFNFSNPGITASAGLTFGVSNPASASFGTGGQLLQLKKPPAGNKRGKR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcttctccttcggagccgggactttggcttccgctaccgcggctgctgcg
ggcaccggcgggggaggtggcggcgggggcttctctttcggaagcactccgagctcaact
ggaggccttaactttgggacgttgggttcaacagctactgctacaagtactccttctgta
ggttttggcactggactttttagctcaaagcctaccacaggttttaccttaggagggact
aatacaggaacagctacaactattgctgcaggattaacattaggcgcacctgtttctact
acttctactacgggccttagtttgggtttcagtaaacctgctggatcagccactcctttt
gctttaccgatcacttctacttcttctggacttgcattatcttctgcccttacttctgct
ccagcagcaggctcttctggttttacattaaacttgggaggcaccactgttccaaccacc
actgtatctacaggactttctctggggggagctttgactggtttaggaggaacacttttc
ccaaatgcaagcacagctacaacaggtcttggacagaatgcttttggtttgacccttggg
acagccgcagcacctgtcaccacagttaatgaaggtctcggtggcatagatttcagtagc
tcttcagataaaaaaagtgacaaaacaggaacaagagcagaggatagcaaagcactaaaa
gatgaaaatttacctcccgtaatctgccaagatgtagaaaatctccagaaatttgtgaaa
gaacaaaaacaggttcaggaagaaatcagccgaatgtcttccaaagcgatgcttaaagtg
caagaggacataaaagctttgaagcaattattatcagtggctgcaagtggattacagaga
aacactcttaatattgataaactaaaactggagacagctcaggaacttaaaaatgctgag
atagcactaaggacacagaaaactcctcctggtcttcagcatgaaaataccgcaccagct
gactacttcaggatcttgattgaacaatttgaagtacaactgcagcagtacagacagcag
attgaagaactggaaaatcatcttgctacccaagcaaacaattcacacataactccgcaa
gatttatccatggctatgcagaaaatttatcaaacgtttgtagctctagctgcacagctt
caatcaatacatgaaaatgtcaagatgctcaaagaccagtatcttgggtacagaaaaatc
tttttaggagatgctgtggatgtgtttgaagcaaggcgagtagaagcaaagaaatggcag
actgccccacgtgttacaactggacctactcctttcagcaccataccaaatgcagcggcc
attgccatggctgcaacacttacacagcagcaacagcctgctacagggccacagccgact
ctgggaattagttttggaacgccattcggttcaggtattggcactggcttgcagtcaagt
ggcttaggctcttcaggccttggaggatttgcaggtagcgctggttttggaagcagtgct
ccgggtgcgccatcgtttggatttggagcagcaaataagccatcaggaagccttagtgca
ggctttggcaattcgaccacatctgggtttaacttcagcaatcctggcatcacagcatct
gctggcctgacatttggggtgtccaatccagcctctgcaagctttggcacaggaggacaa
cttctccagctgaagaaacccccagctggaaacaaaagggggaaaagataa
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