Thamnophis sirtalis (common garter snake): 106539184
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Entry
106539184 CDS
T06107
Symbol
TFDP1
Name
(RefSeq) transcription factor Dp-1 isoform X1
KO
K04683
transcription factor Dp-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03083
Polycomb repressive complex
tsr04110
Cell cycle
tsr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106539184 (TFDP1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106539184 (TFDP1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106539184 (TFDP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106539184 (TFDP1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106539184 (TFDP1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
106539184 (TFDP1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106539184 (TFDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
106539184
NCBI-ProteinID:
XP_013909372
UniProt:
A0A6I9X6B2
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MQEARTEYSTTVSTLPVVIRNKHFVFGLGNMAKDAGLIEANGELKVFIDQNLSPGKGVVS
LVAVHPSTLGKQLLPKTFGPSNVNIAQQVVIGTPQRPSAPNTILVGSPHTPNTHFVSQNQ
TADSSPWSAGKRNKKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSTADAHI
SPNESQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRR
LERIKQKQSQLQELILQQIAFKNLVQRNRHAQQQANRPPTSNSVIHLPFIIVNTSKKTVI
DCSISNDKFEYLFNFDNAFEIHDDIEVLKRMGMAFGLESGSCSAEDLKNARSLVPKALEP
YVTEMAQGSISNVYVSSSSGSASNGTRFSNSDYSNGGDGMLATSSNGSQYSGSRVETPVS
YVGDDDDDDDDEFNENDDDD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagcgcgaacagaatatagtacaactgtttctactcttcctgtggtgatcaga
aataaacattttgtttttggacttggtaacatggcaaaagatgctggtctcattgaagct
aatggagagttaaaggtttttatagatcaaaatcttagtccaggaaaaggtgttgtttca
ttagtagctgttcatccctcaacacttggcaaacaacttttgccgaaaacatttggcccg
tcgaatgtcaacattgcacaacaagtggttattggtacaccacaaagaccatcagcccca
aatactattttagtaggaagtccacatactcccaatacacactttgtatcacagaatcag
actgcagattcttcaccttggtctgctggtaaacgaaacaaaaagggagagaagaatggc
aagggtttgcgacacttctctatgaaggtctgtgagaaggtacagaggaaaggaactacc
tcatacaatgaggtagcagatgagctagttgcagaattcagcactgcagatgctcacatc
tcaccaaatgaatcgcaggcttatgatcagaaaaatataaggcgacgggtctatgatgcc
ttaaatgttcttatggccatgaacattatttctaaggaaaagaaagaaatcaaatggatt
ggcctacctactaattcagctcaggaatgccagaatttagaggtggagagacagagaaga
cttgaaagaataaagcaaaaacagtcacaactacaagaattaattcttcagcaaattgcc
ttcaaaaatcttgttcagcgaaatcgtcatgcacagcagcaagcaaataggccaccaact
tctaattctgtcattcacttgccatttatcatagtgaacaccagcaagaaaactgtaatc
gattgcagtatttctaatgacaagtttgaatatctatttaattttgataatgcatttgaa
atacatgatgatattgaagtattgaagcgaatgggaatggcatttggactagaatctgga
agttgctcagcagaagatctaaaaaacgcaaggagcttggttcctaaagctcttgaacca
tatgtgacagaaatggctcagggatcaatcagcaatgtgtatgtctcatcctcatcaggt
tcagcttcaaatgggacaagattttccaacagtgattactcaaatggaggagatggaatg
ttggctacaagttccaatggatctcaatacagcggctccagagtagagacaccagtgtct
tatgttggggatgacgatgacgacgacgacgatgaatttaatgaaaatgatgatgatgac
tga
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