Thamnophis sirtalis (common garter snake): 106539212
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Entry
106539212 CDS
T06107
Symbol
PPRC1
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106539212 (PPRC1)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
106539212 (PPRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106539212
NCBI-ProteinID:
XP_013909426
UniProt:
A0A6I9X593
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MAALWGGGAGHAGAGGTLPMRAASEPLVGNSFSSTQCLLAEDLHLASLEAETILEAGEFL
ETMQDYLDSSVISIIEDFSSLTEVKNHMDAENELSLLTAITDILDSTDDETLSPFDPIPE
SELLTSPREIENSSFQRFLSFSVTPNEQDLHNIEDFQEPGLCTIMSKKVEANTAGIPFSL
SSSCAKLSAFSNNASSKAFWGEQKLFKTREQESPVLQGSDGEEEEKEVAQGCKESLTAAV
KELEPERDLDECDDPYIIAAENISLDELVRSVHSYCQPTLTLCLNSDNQSPAEKNLTGPL
VLEIMPDGGELLEIKLSPIMESNYTTGLINTEAELLSPALGKELPEHMMRYVGPDRELDS
HKQDGKVVNAALPNIKDGHPQIEDDTQKSTGNQKNTPEPASVAPKNVKFFASKKGCVSTN
IKKKKRKKSREETKYHKTKNCQQVSACPRMQTKIEARKSLSDSSFPKKEPEKTGGKELTL
NQVSQTKETPETQIEWSKCVREKGSKNLSSLVSARDLPYAEEPTQNLGKSDLVPIVQRDV
PGEPHEKNQFFLPMIELSSSETSQMLPGCTTDLTEQLTKDTPCSENKDVTCHPREAKPRP
LSLSEYRQRRRQRQSNNDSIQNTRENQSASKWPSVPKLPTELADLPCLQAPLPSTKATAP
KLAKEPEKPADSITLAPEDKASATTLSVPSSTATLKPRDPPSSQLPSPTLIPVVPTSKVC
AFSHIGPQVSPPLSIPHVPPAPETFLPAPPNHYNLGSSQPVGSSWPHFALLPANYQSLPP
PPLPPPLPPPLPPPATEACPPVFHTVPPLPPPTWPPPPVPLPFVPALPYGSVEWAPLPQS
SYWSGIPVPPPVLPVPYGDQGGLRQSPQVGTLPVSSLFDGFPGQQSTALTPESSCIGFQN
VVSESRSPPVQICQVEAPSAVKVAPRKISDPRRQTQLSTVQSQTEVTSSSSQSLEKLPLL
ASAEKSSKETALTQHGSKSSALQSSGVPLPVPPSHQIVGEPAGKLTFSKEDSQLVEKNPE
LSDSGETTAVAVAQNNTKPPAEEHSSLSASLAPGKQKEPAETQSDDIEHALVAPSPSPLS
GLQKGQKNGHLSKKTSSPMWKNQPFISSAQHKHDKDLVHSFINEIGIEASDLSSLLEQFE
KTEAKTEVSAALKKNKSTGNNGSEIQWEKKMVDRLHAPELINVAGLTPPATPPHQLWKPL
VPVSLLGQNGSTKDTKLLKSLSKSHWKSVTPVHVGAGEHDYCQLTAAQPKGGARWNVKQN
LDITIKPIKTLTRQVLGHTSADIKRPPATVRLKPVVPTCQNPREITNHVNSNKGQTKDSR
TVTADLKPTTLNSTLLETSLIHPCKEALDHRTTIPRSMTRSNDEPCSVLLSPAASPCQDS
GESTLQQLQEIQQKPLASKRSLRCYRSRQRSVSPKSQRGRSRRNHTSRSFSSSSDGDSDT
SSSSSSSSSSSSSSSSQSRSRSPPSKHWRRCRSRNSSSSSAKWSHSRGRSRSPSNSSYRS
RSSSRSPSQHRRNSCKKSYNSSSSYERYQRQKNKYKERAIEERRVVFIGKIHNRMTRAEL
RHRFSVFGDIEDCTLHFREHGDNFGFVTYRYAEDAFAAIEGGHALLRPDEQPFDLGFGGR
RQFCKRSYSDLDSSQDDFQPAHLKNKYDSLDFDTLLKQAQRSLRR
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgtggggcggcggtgcgggacacgctggggctggcggaaccctccccatg
cgggctgcctcggagcctttggtgggcaatagcttttcttctactcagtgtttactggca
gaggatttgcacttggcatctttggaagcagaaaccatccttgaagctggggaattcctg
gaaacaatgcaggactacttagactcttctgtcatttccatcattgaagatttcagcagt
ttgactgaggtaaaaaaccacatggatgcagagaatgaactttccctgttgacggcaata
acagatattcttgatagcacggatgatgagacactgtctccctttgatcctatccctgaa
tctgaattgctcacatcacccagagagatagaaaattcttcgtttcagagatttcttagt
ttttctgtgacacccaatgaacaagacttacacaatattgaggatttccaggagccagga
ctgtgcaccattatgtcaaagaaggttgaagccaatactgctggcattcccttctcatta
tcttcaagttgtgccaaactttcggctttttcaaacaatgcaagtagcaaagcattctgg
ggggaacagaagctcttcaagactagagaacaagaatcccctgtgctacagggcagcgat
ggagaggaagaggaaaaagaggttgcacaagggtgcaaggagagtcttacagcagctgtg
aaagagttggaacctgagagagaccttgatgaatgcgatgacccctatattattgccgca
gaaaatatttcccttgatgagctagtgagatcagtgcactcttactgccagcccaccctc
actctgtgcctgaattctgataatcagtcccctgcagagaagaatctcacaggcccactt
gtcttagaaataatgcctgatggtggagagctcctggagatcaagctctcacctataatg
gaaagcaattacacaactggccttataaatactgaagcagaacttttgtcccctgccctg
ggaaaagaattgcctgaacacatgatgagatacgtaggtcctgaccgagagcttgactca
cacaaacaagatgggaaagtagttaatgctgcccttccaaacataaaagatggtcatcca
cagatagaggacgacactcagaaatcaacaggaaatcaaaagaatacacctgagcctgcc
tcagtggctccaaaaaatgtcaagttctttgcttcaaagaagggttgtgtatctacaaat
attaagaagaagaagaggaagaaatccagagaggaaacaaagtatcacaagaccaaaaat
tgccaacaagtgtctgcctgtcctcgaatgcagaccaagattgaggcaaggaaatctctg
tcagattctagttttccaaaaaaagaaccagagaaaaccggtgggaaagaattgacccta
aatcaagtatctcagacaaaggaaacacctgaaactcaaatagaatggtcaaaatgtgtg
agagagaaagggtccaaaaatctgtcaagcttagtaagtgcaagggatttgccatatgca
gaggagcccacacaaaatctagggaaatctgaccttgtgcctatagtccagagggatgtc
ccaggagaaccccatgaaaaaaaccagttcttcctaccaatgattgagttgtctagctca
gaaacttcccaaatgctccctggttgcactacagatcttacagagcagctgaccaaggat
acaccttgctctgaaaataaagacgtcacctgtcatccaagggaagctaaacctcgacct
ctcagcttgagtgaatacaggcagcgccggcggcagcgccaatctaataatgacagtatc
cagaacaccagagagaatcagagtgccagcaagtggcccagtgttcccaagctcccaaca
gagttggctgaccttccttgcctgcaagctcctttgccatccaccaaagccacagcacct
aaacttgcaaaggagcctgaaaaacctgccgactccattactcttgcccctgaggacaaa
gcaagtgccacgaccctttccgtgccatcttccactgcaactctgaaaccaagagatcct
ccatcttcgcagcttccttcacctacacttattcctgttgtgcctactagtaaagtatgt
gctttttctcacattgggccacaagtgtctccaccattgtccatacctcatgtaccacca
gctccagagactttcctaccagctcctcctaatcactacaatttgggctcatcccaacca
gtaggatcttcatggcctcactttgctcttctaccagctaattaccaaagcttaccacca
ccaccactaccaccaccactaccaccaccactgccaccacctgctactgaagcttgtcct
cctgtcttccatacagttccccccttaccccctccaacgtggcctcccccacctgttcct
ttgccttttgttccagccctgccttatggctctgttgagtgggctccactgccacagtct
tcctactggtctggaataccggtgccacctccagtgttgcccgtcccctacggagatcaa
ggaggtctcaggcaaagtcctcaggttggcactttacctgtctcatctctttttgatgga
tttcctggccagcaaagtacagctttaacaccggagtcctcctgcattggatttcaaaat
gtggtcagtgaaagtcggagcccgcctgtccagatatgccaagtagaagctccctcagca
gtaaaggtagctcccagaaaaatatctgacccaaggagacaaacacagctctccacagtt
caatcccaaactgaagtaacttcaagcagttctcagtcattggagaaactgcctttattg
gcatcagctgagaagtcttcaaaagaaacagcattgactcagcatgggagcaaaagttct
gccctgcagtcctcaggggtgcccctccctgtgcctccttcccatcaaatagtgggagaa
cctgctggtaaattgacgttctcaaaagaagactctcagcttgtagagaagaatcctgaa
ctctctgactctggagaaactacggctgttgctgtggctcagaacaacacgaagccacca
gcagaggaacattcttccctttcagcttccttggcacctggaaaacaaaaggagccagct
gaaacccagtcagatgacatagaacacgccctagtggctcccagtccttcaccattatca
gggctccagaaaggtcagaaaaatggccatctttccaagaaaacatcatcccctatgtgg
aaaaaccagcctttcatcagctctgcacagcataagcacgataaagatcttgttcactca
tttatcaatgagattggaattgaggcctctgacctatctagcctgctggagcaatttgaa
aagactgaagccaaaacagaagtatctgctgcattaaagaaaaataaatctacagggaat
aatgggtctgagatacaatgggaaaagaaaatggtggaccgacttcatgcacctgagctc
atcaatgttgcaggtttgactccaccagccactccaccccatcagctgtggaaacctttg
gtacctgtctcattgctgggacagaatgggtccacaaaagataccaagcttttgaaatcc
ctaagtaaatctcactggaaatctgtaactcctgtccacgtaggcgctggtgagcatgac
tattgtcaattaactgctgcacagccaaagggaggtgccagatggaatgtcaaacagaac
ttggatatcaccataaaaccaattaagactttaacaagacaagtgctaggtcacacctct
gctgatataaagaggccccctgctactgttagactgaagcctgtagttcctacttgccag
aatcctagagaaattaccaaccatgttaattccaacaagggccaaaccaaagattccagg
acagttacagctgacttgaaacctactaccctaaattcaacattgttggagaccagtctt
atacatccatgcaaagaggcattggaccaccggactactattccaaggtctatgactagg
agcaatgatgagccatgctctgtactgctgtcaccagctgcatccccttgccaagattca
ggagaatcaacattacagcaacttcaggagattcagcagaaaccactcgcttcgaaacgc
tcattaagatgctaccggagcagacagaggtcagttagtccaaaaagccaaagggggaga
agccgacgaaaccatactagccggtccttcagttcaagctctgatggtgacagtgatact
tcatcatcttcatcgtcgtcttcgtcgtcgtcatcctcttcttcgtcacaatcacgttct
cggtctccaccatccaaacactggcgaagatgtcgctcacgcaattccagctcttcttct
gctaaatggagccattcaaggggcaggtcccgctctccctccaattcctcttatagatca
agatcatcttccaggtccccttctcagcacagaaggaatagttgcaagaaaagctacaat
tccagcagttcctatgaacgttaccaaaggcagaaaaacaaatataaagaacgtgcaatc
gaggaacgccgcgttgtcttcattggtaagatccacaacaggatgacacgagcagagttg
cgacatcgtttctctgtttttggggacattgaagactgcacactgcacttccgagagcat
ggggataactttggctttgtgacttatcgatacgctgaagatgcctttgctgctatagaa
ggtggacatgcattgcttcgtcctgatgaacagccctttgatctgggctttggaggacgt
cgacagttctgtaaaagaagctattctgacttagattccagccaagatgactttcaacct
gcccatctgaagaataaatatgattctcttgactttgacaccttattgaagcaggctcag
cgaagtctgcggaggtag
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