Thamnophis sirtalis (common garter snake): 106539215
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Entry
106539215 CDS
T06107
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106539215
04090 CD molecules [BR:
tsr04090
]
106539215
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106539215
CD molecules [BR:
tsr04090
]
Proteins
106539215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Fib_alpha
Apolipoprotein
BAR_3_WASP_bdg
GPS2_interact
Peptidase_M75
OmpH
DUF948
Tweety
Exonuc_VII_L
IL15
HOOK
DUF1664
DUF3375
Mitofilin
COG4_N
Motif
Other DBs
NCBI-GeneID:
106539215
NCBI-ProteinID:
XP_013909432
UniProt:
A0A6I9XY89
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPLQNLTQPVYHQPPSNSHGDLQGLFNMVNGYLRVVQPNSFPKDLLTYVINHQNFFNNQT
VYKEILKYETGFLVCAVIGLLFIVLVPLVGLFFCCCRCCGHCGGQMYQKQNKHSACKRRT
LFCFLLGITVVLLAGDICAYVSNQRISQGLEKGFVIFNNTVSNLDVYLNSLPQEINQIVK
SSNVPFEEVNNSLSKIGDTLGSKIKEKLGERANKVLNITEELLQDIQSIDRELQKVNQTG
ARLQKMQEELNKNLTDLRNDINETLKTCGSRCEKVSVENLTPEANFSTIPDVNDKLNLIS
ELNPSELNNTIIKARNVINEIPEKVSNQTKNEASEIQDLLNEVRKGINTISDKFHKMISL
KEISAFMENIVKKANYYKPHVIKYDGYRWGVGVCLCCLLLVIIAFNVLGLLLGGLGLDSK
GMQCPTNRGCLSNTGGNFFMASVGFSFIFSWLLMLLVLVLFLVGGNSYTLVCQPWANGII
LQYLDTSGLIPQLNVKKLMNLNGSDVNLTSIYKNCEGNASLWNTFHLDEVISLNDTFNIS
KYTQDINSTLNKIEINIEPIELLNDEQKSRLRKLSSKDGPLNVDFNSTLEQLNQNLTKQD
LNTLINNLEELANITDDGIRNDLRRHANELKNIQNWTNLKFLPEIEALKGSIQRLQKSTP
QIPILINLTLSEIDDTNVFIKDQTEKIINYETNTFILNIVDYFSSYLTWIARSIIGEFGR
CGPVAWALDSVNTVVCNYLVDSLNAFWFSLAWCTVFLLPSIIFAVRLAKFYRRMSVEDIY
EDEIMENFELSRQSMFKMPRPQLKK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcaaaacctcacacaacccgtctatcaccaaccacccagtaactcacatggt
gacttacaaggcttgttcaatatggtgaacggttacttgagggtcgtgcaacccaacagt
ttccccaaagatctcctgacatacgtgatcaaccatcaaaatttctttaacaaccagaca
gtctataaagagatactcaagtatgagacgggcttcctggtttgtgctgtcattggtctt
ctgttcattgtccttgtgcctctagtgggcttgtttttctgttgctgccgctgctgtgga
cactgtggcggtcagatgtaccagaagcagaataagcacagtgcctgcaagagacggact
cttttttgctttctgctgggcatcactgttgttcttctggctggagatatatgtgcgtat
gtcagcaaccaacgtatatcccaaggtctagagaaaggttttgtcattttcaacaataca
gtgagcaacctggatgtttatctgaattctttaccccaggaaattaatcaaattgtcaag
tctagtaatgtgccattcgaggaggtcaataatagcttgtcaaagattggtgataccttg
gggagcaagattaaagaaaaactaggtgaacgagcaaacaaagtattaaacataactgag
gagcttcttcaagacattcagagcatagaccgggaactccagaaagtcaaccagactggt
gctcgcttgcagaaaatgcaagaggaactgaacaaaaatctgactgacctgagaaatgat
atcaatgagacactgaaaacatgtggcagccgatgtgagaaagtgtccgtagagaacctg
acacctgaggccaatttctcaacgattcctgatgtcaatgataaacttaatttgatatct
gagctgaacccttcagagctcaacaatactataataaaggcaagaaatgtcataaacgaa
ataccagagaaagtctctaatcaaaccaaaaatgaggcgtctgaaatacaggatctactt
aacgaagtcaggaaaggaattaatacaatcagtgataaatttcacaagatgatctcactg
aaggaaatctctgcatttatggaaaatattgtaaagaaggcaaattactacaagccacat
gtgatcaaatatgatggctacaggtggggtgttggcgtctgcctttgctgcctgctgctt
gtaataattgccttcaatgtgttgggccttttgcttggtggtcttggactagattcaaag
ggaatgcaatgccctaccaatcggggctgcctgtccaacactggtggaaacttctttatg
gcgagtgttggattcagctttatattttcatggttgctgatgttgctggttctagtacta
tttttagttgggggcaattcatacacattggtgtgccagccttgggccaatggaattatc
cttcagtatctggacacatctgggttgatacctcaattaaatgtgaaaaagctcatgaat
ttgaatggttctgatgtaaacctgaccagcatatacaagaattgcgaaggaaatgcatcc
ttgtggaatacctttcacctagatgaggtcatctctttgaatgacaccttcaacatcagc
aagtacactcaagacattaattcaaccttgaataaaatagaaatcaatattgaacctatt
gaactcctgaacgatgagcaaaaaagcaggttgcggaaactgagttcaaaagatgggcct
ctgaatgtggattttaatagtactcttgaacagcttaaccagaatctgaccaaacaagac
ttgaataccctgattaataacttggaagaattggcaaatataactgatgatggaatacgt
aatgatttgcgacgtcatgcgaatgagctgaagaatatccaaaattggacaaacctcaaa
tttcttccagaaattgaagccttgaagggaagcatccagaggttgcagaaatctacccct
caaattccaattctgataaacctcacgctgtcggaaatagatgacaccaatgtatttata
aaggaccagacagagaaaattataaactatgagaccaatacttttatattgaacatagtg
gattatttttcctcttatctgacatggattgcgcgttctatcataggagaatttggtcgc
tgtggtcctgtagcctgggcactggatagcgtgaataccgttgtctgcaattaccttgtt
gattctttgaatgccttctggttcagtctggcctggtgcacagtctttctgttgccaagt
atcatcttcgctgtgcggcttgccaagttttatcgtcgaatgagcgtcgaggacatatat
gaggatgagattatggaaaactttgaactgtcaaggcaaagcatgttcaaaatgccccgg
cctcagctgaagaaataa
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