Thamnophis sirtalis (common garter snake): 106539368
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Entry
106539368 CDS
T06107
Symbol
TCF7L1
Name
(RefSeq) transcription factor 7-like 1
KO
K04490
transcription factor 7-like 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04310
Wnt signaling pathway
tsr04520
Adherens junction
tsr04916
Melanogenesis
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106539368 (TCF7L1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106539368 (TCF7L1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
106539368 (TCF7L1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106539368 (TCF7L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106539368 (TCF7L1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
106539368 (TCF7L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106539368
NCBI-ProteinID:
XP_013909629
UniProt:
A0A6I9X2W9
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MLGLPRFIERSSKVATAVKNKTKQDGILWHQEPKSERPPQPPRESFQKPRDSAAAEVIRR
QQDGGFFKGTPYPSYPFLMIPELGNPYLPSGALSPSGARTYLQVKWPLLDVPSGATLKDA
RSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPSSPPSHLSPEIDPKTGIPRPPHP
SELSPYYPLSSGAIGQIPHPLGWLVPQQGQPVYSIPPGGFRHPYPALAMNASMSSLMSSR
FSPHMVPPPAHGIHPSGIPHPTIVSPIVKQEPTPSSLSPEGSSKTPVIVKKEEEKKPHIK
KPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKERQLHS
QLYPTWSARDNYGKKKKRKREKQTQQHIQETGNPMASKSKKPCMPYLSADKSCDSPASSH
GSMLDSPATPSTALASPAAPAATHSEQAQPLSLTTKPEARAQLSLHSASFLPGKAASSSS
SLTSQSPLLSRALPFSSMPPTALLTTPPTFAAISSSQAALAMLQAQPLSLVTKPAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcttgccacgattcattgagcgatcgtccaaagttgcaactgcggtgaaaaac
aaaacaaaacaggatggtattctctggcaccaggaaccgaagtcggagaggccgcctcag
ccgccgcgggaaagtttccagaagccgcgggactctgcagcagccgaagtaattagaaga
cagcaagatggaggtttttttaaagggactccttatccaagttatcctttcttgatgatc
ccagagctgggaaacccttaccttcctagtggagccttgtctccaagtggtgctcgaaca
tatcttcaggtgaaatggccacttctagatgtaccatctggagctacactaaaggatgca
agatctccctctcctgcccatttatcaaacaaggttcctgtagttcaacatccacatcac
atgcacccactgacaccactcatcacctatagcaatgatcacttttcaccaagttcacca
ccttcccacctctccccagagattgacccaaagacaggaattccacgaccaccccaccct
tcagaactctctccttattatccgttgtcttctggtgccattggacaaattcctcatcct
ttgggatggctcgtaccacagcaagggcagccagtgtattccattcctccaggtgggttt
agacatccatatcctgccttggccatgaatgcctcaatgtccagcttgatgtctagcagg
ttttcccctcatatggttcctcctccggcacatggaatccatccctcaggaatcccacac
cccaccatcgtgtcgcctattgttaaacaagagccgacaccatccagcctgagtcctgaa
ggaagctcaaaaacacctgttattgtcaaaaaggaagaggagaagaagccccatataaaa
aagcctctgaatgcgttcatgttgtacatgaaggaaatgcgcgccaaggttgtggcagag
tgtacgttgaaggagagtgccgctatcaaccagatcctaggaagacggtggcattcattg
tcccgtgaagagcaagccaaatactatgagttagcacggaaggaacggcagcttcattct
caactctaccccacttggtctgcccgagataactatggtaagaaaaagaaaagaaaaaga
gagaaacaaacgcagcaacacatccaagaaacaggaaatccaatggcttcgaagagcaag
aagccctgcatgccatacctgtcagctgacaagtcctgtgacagccctgcgtcctctcat
ggcagcatgttagattctccagccaccccctccactgccttggcatcgcccgcagcgccc
gctgccacccactctgagcaagcacagcccctctccttgaccaccaaacctgaagccagg
gctcagctatctctgcactcggcgtctttcctgcccggcaaggctgcttcctcttcctca
agcctcaccagccagtctcctctcctctccagggctctgcccttctcctcaatgcccccc
acggctcttctgactacgccgccgacttttgcagccatttcgtcttctcaggccgccctg
gctatgttacaggcccagccgctctccttggtaaccaaaccagccgaatga
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