Thamnophis sirtalis (common garter snake): 106539419
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Entry
106539419 CDS
T06107
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40 isoform X1
KO
K03729
class B basic helix-loop-helix protein 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106539419 (BHLHE40)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
106539419 (BHLHE40)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
106539419
NCBI-ProteinID:
XP_013909685
UniProt:
A0A6I9XYX4
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MLSPPLFFSPSFQETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVL
ELTLKHVKALTGLIEQQQQQIIALQKGLHADELPPRSLESSQEIFRSGFQMCAKEVLQYL
AKHENAKDLKSSQFMTHLHRMAEALQGGISRKPGDATPKLTDLKDKSPSLTKAAEAHGKN
CVPVIQRTFAHSSGEQSGSDTDTDSGYGGELEKSDSKSDPQYFKKDTELKYTAQERITSI
KQENEDPPAKRTRMDMSEDEDHFSSNVLGSSSSNFLGPHPHQPPLCLPFYVFPPSATAYL
PKLEKCWYPASMPILYPSLPTSTAALSGLMNPEKMSSPLLLPHRLSSPMPSHSPMDSTAL
LQALKQMSPLDLETKD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccccccccctttttttttccccctcctttcaggagacttacaagttgcctcac
aggctcattgagaagaaaaggcgtgatagaattaatgaatgcattgcccagctgaaggat
cttttaccagaacatctcaaacttacaactttaggacacttagaaaaagcggttgttctt
gaacttaccttgaagcatgtcaaagcattaaccggtcttattgaacaacagcaacagcag
atcatagctctccaaaaaggtttacatgctgatgagctgccaccaaggagtcttgaatct
agccaagagatatttcggtccgggttccagatgtgtgccaaagaagtgttacaatacctg
gccaagcacgaaaacgccaaggatctgaaatcatcccagttcatgacccacctacacaga
atggcagaagctctacagggtgggatcagccgaaagcctggagacgccaccccaaagctt
acagatctgaaggataaatctccatctctgaccaaagctgctgaggcacatgggaaaaac
tgtgtgcctgtgattcaaaggacttttgcccattccagcggagagcagagtggtagtgac
acagacacagacagtggatatgggggcgagctagaaaaaagtgactctaaatctgatcca
cagtatttcaaaaaggacacggagctgaagtacactgcccaagagagaatcacttctatt
aaacaagaaaacgaggatccaccagcaaaacggaccaggatggacatgtctgaggatgaa
gaccatttcagtagcaatgtgcttggctcttcttccagcaacttcttaggtcctcatccc
caccagcctcccctctgtttgcctttttatgttttccctccctcagcgacagcctacctg
cctaagttggaaaaatgttggtacccggcctccatgcctatcttgtatccaagcctccca
acatccactgcagcactttcagggttaatgaacccagagaaaatgtcttctcctttgcta
ttgcctcaccggctctcttcgcctatgccatcccattcccccatggactctacagctctt
cttcaagctttgaagcagatgtctcctttggatctggaaaccaaagactaa
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