Thamnophis sirtalis (common garter snake): 106539650
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Entry
106539650 CDS
T06107
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106539650 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106539650 (TRIM25)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106539650 (TRIM25)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106539650 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
ANCHR-like_BBOX
zf-RING_5
RING_XB3-XBAT31
zf-B_box
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106539650
NCBI-ProteinID:
XP_013909954
UniProt:
A0A6I9X3T3
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MKRWLSSDASVMAGFVDPLSMFGLEEELTCSICLCVFQTPVTTPCGHNFCLPCLELTWMD
AEDKFSCPQCRASFESRPDLKKNTVLCKVVEQFQSNQGDLFKGTCAEKKEKVDSSPAKPR
SPSPVPCDSCLVVDAAKTCLTCMVSFCQEHLAPHLESPAFKSHQLVPPMNELQQKKCEAH
SKLLEFFCKEHGISICCFCLLSHKTCSTTPLKEAKEAKELVLKKRLTELCALNDKTTKSL
EQVRAQQKQLSNTTNRKLDLLKSEFLEIVALIHEEEMNSWRKIKLEEKRVLDKFEYVHAV
LGKKKNEIQRERDEIEVALAEMDDITFLKRSTKLRQVPFSDVFVPRIELDQNLLGAVYQK
ACNLKEITARFLGIHQEQKKKGNAGAFVVPLKTPVVEEVCPAAAGKPRNETDATGITKGQ
RSRPAKRSESPKQRAQSCSKAETKSETTSLDTFLKKPREELLEFATQFTLDRHTAHKNIL
LLEKCTKLSVTENVQDYKPHPQRFLSFYQVLSFQCFKKGIHYWEVDLENNNFCAVGICYG
SMLKRGPESRLGRNSSSWCIEWVNNKISAWHNNKETSLPCNKATKIGILLNYDGGFVIFF
CVTEKKTFPLYKFKIEFTEAVYSAFWVFSNGATITLCQLKS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtggctttcctccgacgcctcagtcatggctggtttcgtcgacccgttgtcc
atgttcgggctggaagaggagctgacttgctccatctgcctgtgcgtttttcagacgccg
gtcactacgccctgcggccacaatttttgcctgccttgcctggagctaacctggatggac
gcggaggacaaattcagttgcccccagtgcagggcttctttcgaaagccgccccgacttg
aagaaaaacacggtgctctgcaaggtggtggagcaattccagagcaaccaaggtgacctc
ttcaaagggacgtgtgccgagaagaaggagaaggtggatagtagcccagccaagccgagg
tctccctcgccagtgccctgcgacagctgcctggtggtcgacgcggccaaaacctgcctc
acctgcatggtctccttctgccaggaacacctggcgccccacctggagagcccagccttt
aagagccaccagttggttccacccatgaatgaacttcagcagaagaagtgtgaagcccat
agcaagctcctggagttcttctgcaaggagcatggcatctccatctgctgtttttgcctg
ctttctcacaagacctgctccactaccccactaaaagaggccaaggaagcaaaggagtta
gtgctgaagaagagattgacagaactctgtgccttgaatgacaagactacaaagtccttg
gaacaagtacgagcacagcaaaagcaactcagcaataccactaatcggaagctggatttg
ctgaaatcagaattcctagaaatagtagctttaattcatgaagaagaaatgaattcgtgg
aggaaaatcaaattggaagaaaaaagagtcctggataaatttgaatatgtccatgcagtc
ctgggtaagaagaagaatgaaatccagagggagcgagatgaaattgaagtggccttggca
gagatggacgacatcacatttttaaagagatcaacaaaactgcgacaggtacccttcagc
gatgtgtttgttcccagaatagagttggatcaaaacctgctaggtgctgtttatcagaaa
gcctgcaacctcaaagaaattacagcacgatttttgggtatacatcaggaacagaaaaaa
aaaggtaatgctggcgcttttgtagtcccattgaagacacccgtggtggaagaggtatgc
ccagcagctgcaggaaaacctaggaatgaaacagatgccactggtataactaagggacag
agaagtcggcctgccaagcgctcggaaagtccaaagcagagagcgcaaagctgcagcaaa
gctgagacaaagagtgaaacaacaagtcttgatacttttttaaaaaaaccaagagaggag
cttctggaatttgctacgcaatttactctggatcgccacacggctcataagaatatccta
ttactggagaaatgtaccaagttgtctgtcacagaaaatgtacaggattacaaaccgcac
cctcagcgattcttaagcttctatcaagtgctttctttccagtgtttcaagaagggaatc
cattactgggaagttgacctggagaacaacaacttctgtgctgtcggcatctgctatggt
agcatgctaaaacggggcccggaaagccgcctaggacgcaatagcagctcctggtgcatt
gaatgggtcaacaataagatctcagcttggcacaataataaagaaacatctctgccctgc
aacaaagcaacgaagattggtatccttctaaattacgatggggggtttgttattttcttt
tgtgtcactgagaaaaaaaccttcccactctataaattcaaaatagaattcacggaagct
gtctattccgcattctgggtgttttctaatggagccaccattacactctgccagctgaag
tcataa
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integrated database retrieval system
