KEGG   Thamnophis sirtalis (common garter snake): 106539808
Entry
106539808         CDS       T06107                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsr03032]
    106539808 (RIF1)
DNA replication proteins [BR:tsr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    106539808 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 106539808
NCBI-ProteinID: XP_013910176
UniProt: A0A6I9X7E1
LinkDB
Position
Unknown
AA seq 2512 aa
MGPCDGSSMRALLETLEDPSASPGVLTDAWLTLTNRLTEEEEDEDEGKEFAAEVENCFPQ
LYKLFMTHIPTENLELSSAALQTLGFCVCNPKIASLLCEIEIHELLSLLNSVAINSGDKH
IRTRALWVISKQFFPPDTVGKLVPNIIAMLETILKGDSHSMVVEHEALNVIIRLLEQAPS
DMEEQAVTWAKMIIPLLVHSAHKVQLKAASALEMGLPLLQQRQEVIAVAEQLLTTKVIPE
LQKLFFSKHETYILKLWPLFVKLLGKTLHHSGSFINSLLHLEELGFRSGSPVVKKIAFIA
WKSLIDNFALNPDILCSAKRLKLLMQPLTSIHVRTETLALTKLEVWWYLLMRLGSQLPVH
FEQVCVPLIQNTLSLDASLLQENSSRLISNQNIAIPGCSRKSGVFPFGNVANPRMTLNSS
NEGAVIPSIQLLGIEMLLHFFMGPEVLTFAKENNIVLSLEPLQYPVITSPSFFCKYASVF
INAAQDGFIAIGKDVSDFMLTAIWRELVGFVKAAIDSGNKRDRQHSEVLTMLLQTLKNII
LSKELPVLNSLPLLEVAIKELPPKVLGSPAYQIADMDLLNGTPALFLVQLLFCEDLLKFG
VENKRFFLNYETLVECTLSGPASPLAFTQSVLTIVSESALHFENKEYVWRMWSIIVNPLI
ECIKQTNEVNQGDALEHNFNAIYCALLLPVNCIFSSSEFPEFTMKKLLRSWSELYKAFAR
CTLLVPTADDNVCCEELCAKIISGLKDEERLNQSMLDGLSHITAVMVECINFAPYDVKFP
LAHKPPQNLVEWARREKNPLGKMSSLIKLLIILMNSLQMLISEEFDCEPFAPLGFMIVGI
LHNIIGRVSLPSMLRPVLRFIAKPFAALYEKIQSCNQPSKLANPLSPGLNNKCEKLLADS
LTCFQTHYPGSFDDEVLGEIFPLLSVMFSNRNRLVCSHAVSFWNATFGKARTMEYPEELK
PILNTTRQKFILLLPNFESCEIMEGSSTTYSDYTENSQWGASISGIKVNPNGKRDSFLAR
TGEPEEENIDFHITPKKIKLELSGTKSNIKNIPLEEENTVDFVYIPVETKKRVLTEHQKE
VLRTKRDDIPVMYNNLDVSQDVLFSQDTQNQEESLEIPIIVDVKQEHEKKEDKSTPQKKE
ATSLVIPHGVTGNYKSNISLENITSTVSEQPNSFQKENLDLKNEELNICVPIQSPILDST
LNENPPTSSSNSSASSDIISATPQVVVNRRQAFVTLEKFDDAESRPFSPSVFSNITVTLT
NPFIQNESPVVSDVSSKDKPNLENKGRVKFTARKTMPGTRRTRSEFLNALEMCVKAKRIK
EENSPDPKLQPNNTDDGLRQNKTLDDKASEQIQSDQEEKNQVSDTPCEDKHEISVDTQIA
EHSLDNQSQIPGAGAADSTTMESKVLLDIVKNENVVPNLEHKENTATEVDVREEVVPDVN
QSPDISLNQKTLRRSLRRKAETDGAVDSQDNENNQQKKDNEKDDEKIMPKKMAQNKETSG
QKEKAETLEKAADAPICVPINNATENINSKENSQEELDMSLGKSERSPAASDLEESGPDT
SVEKHKVFPRYHTRRAASQGLLASMENSESDISETREEGAKKRRSGKLKKNDSPGNQAKP
DSQELSSQAAVEIQTRSVGKQKITSSGKTEVPSMSNNAKDIKQDKSTPPLSPCVDLKENA
GLTRPRASSDTGRKAANRRESTSEPVLENGQETSALDTSSVVPINSNDISEDHASATAVG
ALPSPKRILDMSECQHKRSKRTRKSRSCECCDEKLSPQVEKLSSEPKKASTPEPKLKEPR
KNLSKVTVALTLIPVAEEIHFAQRLNVEPCATSTPLPFVKDAADWKEASNVAKSVSGVPR
NKSPNVEPEKLACVQSENDKPVAGIPDVPFSETISESRSMDSQSEMLSAQGQPLEPGSVD
SHSEMLRAKDQDLEPGPMDSHSEEVSAKDQPLEPGSVDSHSEMLSAKDQPLEPGPVDSHS
EEVSAMDQPLEPGRMDSHSEEVSAKDQPLESGSVDSHSEESVMDQGLEPDSMDSCSEESV
MDQGLEPGSMDSHSEESVMDQGLEPGSMDSHSEEVSAKDRGLEPDAEAETGMEVCSNQNG
HLESETDTEIKIIQVVGAQPEESVVQNTVEETAVTSATQVAELQENETSEEEGAEDNAAN
APSQPSTLVMWQNKISTLDSPPKCKELDFLSLAKVSGSPTGTQARCLWSPSASPSTSILK
RAIKREPEEDSSSPANKNRRVSFANPIYQEELADDIDRRSPILRIHPCNNGSQSSRSAKS
SSSHQAKLITTPTKGSLSPGTRSHKYKSSKKCLITEMGKESTSPVPTESVYPALMGCKAS
VDIILPQITSNTWTRGLGHLIRAKNIRTVGDLSSLTAAEIKTLPIRSPRVLNVRKVLKGY
HEQQVKSRGMEENTGLDNTEKSEIHVMDDTFFSSNENADQCEPEVSSSGESSAIDLWTQV
NLLADQLSSERLRNYSGNELFEMQEKLHSMTDCIMKTLKTRWMLSRSCETTV
NT seq 7539 nt   +upstreamnt  +downstreamnt
atgggaccctgcgacggttcaagcatgcgggccctactggagaccctcgaggaccccagc
gcctctccgggggtgttgacagacgcgtggctgaccctcacgaatcgtttgactgaagag
gaagaagatgaagacgaaggaaaagaatttgcagctgaggttgaaaattgttttccccag
ctttacaagttatttatgacacatattcctactgaaaatttggagttgagcagcgcagct
ttacaaaccttaggattctgtgtgtgtaatccaaagattgcttccttattatgtgaaata
gaaatacatgaattactatctctattaaacagtgttgctataaattcaggagacaaacat
attcgcacaagagcactctgggtgatttcaaagcagttctttcctccagatacggttgga
aaattggtacccaatattattgctatgctagaaacaatacttaaaggagattcacattcc
atggtggttgaacatgaagcgctaaatgttattatccggctgttagaacaggctccatct
gacatggaggaacaggctgtgacgtgggctaagatgataattcctttgctggttcactca
gctcataaagtacagttaaaagctgctagtgctttggaaatgggtctaccgcttcttcag
cagcgccaagaggtgatagcagttgctgagcaactcctgactacaaaagtaattccagaa
ctccaaaagctatttttttcaaaacatgaaacatatattctgaaactgtggcccctgttt
gtaaagctgcttggaaaaacactgcatcatagtggaagctttatcaattccttgctacat
ttagaagaacttgggtttcgtagtggctccccagtggtgaagaaaatagctttcattgca
tggaaaagtctaattgataactttgctttaaatccagatatattatgtagtgcaaaaagg
ctaaaattgctaatgcagccactgacctctattcatgtgagaactgaaactctggcactg
accaagcttgaagtttggtggtatttattaatgaggcttggatctcagcttccagtccac
tttgaacaggtttgtgtaccattaattcagaacactttaagccttgatgcctctctgcta
caagaaaattcatcacggttaatttctaatcagaatatagctattccaggttgttcacga
aaatcaggggttttcccttttggaaatgttgccaatccaaggatgactttgaattctagc
aatgaaggagctgttattccatctattcagcttctaggaattgaaatgctacttcacttc
tttatgggaccagaagtattgacttttgccaaggaaaataatattgtgcttagtttagaa
cctcttcagtacccagtaattaccagtccttcgttcttctgcaaatatgccagtgttttt
ataaatgcagctcaggatggtttcattgcaattggaaaagatgtttctgattttatgctc
actgctatatggagagaattagttggttttgtgaaagctgcaattgattcaggcaacaaa
agagatcgacaacattcagaagtgttaactatgttgctgcagactttaaaaaacattatt
ttgtcaaaagaattgccagtattaaactcattgcccttgttagaagtggctattaaagaa
ttgcctccaaaagtattaggatcgccagcctatcagattgctgacatggatcttctgaat
ggaactccagcattgttcctggttcagcttttattctgtgaagatcttcttaaatttgga
gttgaaaataaaagattctttttaaattacgaaactcttgtggaatgtactttgtctggc
cctgcgtctcctctggcttttactcagtctgtactcacaattgtgagcgaaagtgccctg
cacttcgaaaataaggaatatgtgtggcgaatgtggagtattatagttaacccattaatt
gaatgcattaaacagacgaatgaagtaaatcaaggggatgctttggagcacaatttcaat
gcaatttactgtgcactgttgctaccagtaaactgtatattttcatcttctgaatttcca
gagtttaccatgaaaaaactactgcgttcttggtcagaactatataaagcatttgcccgt
tgtacattactagtaccaacagcagatgataacgtatgctgtgaggaactctgtgccaaa
ataatatctggattaaaagatgaagaacgtctaaatcaatccatgttggatgggctctct
catattacagcagtcatggttgaatgcatcaattttgcaccttatgatgtaaaatttcca
ttagcacataaacctccacagaatctagtggagtgggcgagaagggaaaagaatcccctt
ggcaagatgtcttctttaattaaacttctgataatactgatgaactctcttcagatgctt
atatccgaggaatttgactgtgaaccattcgctcctcttggttttatgattgttggtatt
cttcacaatatcattggccgtgtctctttgccttctatgctcagaccggtcttgagattt
attgcaaaaccttttgcagcattatatgaaaaaatacagtcttgtaatcaaccttcaaag
ttggctaatccattgagtcctggactcaataacaagtgtgaaaagttactggcagacagc
cttacttgttttcagacacactatcctggatcctttgacgatgaagtcttgggagagatt
tttccgttattgagcgtaatgttttcaaataggaatagattggtatgcagccatgctgtt
tcgttttggaatgcaacatttggaaaagcgcgcacaatggagtaccctgaagaattaaaa
cctattttaaatacaacaagacaaaaattcatactcttactgcctaattttgaaagctgt
gagataatggagggatctagtactacatattctgattatacagagaattcccagtggggt
gcaagcatcagtgggataaaagtaaatcctaatggaaaaagggactcattcctggcccgg
accggtgagccagaggaagaaaatattgattttcacattacacctaaaaagataaagcta
gaattatctgggacaaaatcaaatataaaaaacattcctttggaagaagaaaatactgtg
gactttgtgtacattcctgtagaaacaaaaaagcgagtcttgacagaacaccaaaaagaa
gttctaagaactaaaagggatgatattcctgtcatgtataataatctggatgtgtctcaa
gatgtcctgttttcccaggacactcaaaaccaggaggagtctttggaaataccaatcata
gttgacgtaaagcaagaacatgagaagaaagaggacaaatcaacaccccagaaaaaagag
gcaacaagtcttgtcattccacatggagtaactggaaattacaaatcaaatatatctctg
gagaacattacttctactgttagtgagcaacctaatagctttcagaaagagaatttggat
ctgaaaaacgaagagttgaatatctgtgttccaatacaatcaccaatattagattccact
ttgaatgaaaatccccctactagcagcagcaactcctcagcttctagtgatataatttca
gcaacaccacaggtagtggtgaacagaaggcaggcgtttgtaactttggaaaaatttgat
gacgcggagagcagaccttttagtccttcagttttcagtaatattactgtaacattaaca
aatccgtttatccagaacgaaagcccagttgtttcagatgtctcttcaaaagacaagcca
aacctggagaataaaggtcgtgtaaaattcacagcaagaaaaactatgcctggcacaagg
aggacacgctcagaattcttaaatgctctagagatgtgtgtcaaagcaaaaagaattaaa
gaagaaaattctcctgatccaaaattgcagcctaacaacacggatgacggtcttagacaa
aataaaactttggacgacaaagcctcagaacaaatacaatcagatcaagaggaaaaaaat
caggtttctgatacgccttgcgaggataagcatgaaatatcggtggatacacaaatagca
gaacattcgctagataatcagtctcagatccctggtgctggtgcggctgacagcacaaca
atggagagtaaagtcctcctggacatagttaaaaatgaaaatgtggtgccaaatttagag
cacaaagagaatacagctacagaggtagatgttcgtgaggaagtagtgcccgatgttaac
caaagtcctgacatttcacttaatcagaaaacattaagacgttctttaagacgaaaagca
gaaactgatggagctgtagatagccaagataacgagaacaatcaacaaaagaaggacaat
gaaaaagatgatgaaaagattatgcctaagaagatggcacaaaataaggagacctctggg
caaaaggaaaaagctgaaacacttgaaaaagcagcagatgcaccaatatgtgtgcctata
aacaatgctacagaaaacataaactctaaagagaacagccaggaagagttggacatgagt
cttgggaaatctgaacgcagtcctgctgcatctgaccttgaagaatcgggcccagatacg
tctgtggagaaacacaaagtatttccacggtatcatacaagaagagcagcttcacaagga
ttacttgccagtatggaaaactctgaatctgatatcagtgaaacaagagaggaaggagca
aaaaagagaaggtctgggaaattgaaaaaaaatgattcccctgggaaccaagcaaagcca
gacagtcaagagctttcttcacaagctgcagtagaaatccaaactaggtcagtaggaaaa
cagaaaataacttctagcggaaagacagaagtgccttcgatgtctaataatgcaaaggat
ataaagcaagacaaaagtactcccccattaagtccctgtgtggatcttaaagaaaatgca
ggcctgacacgtcctagagcctcttcagatacagggagaaaggctgctaacaggagggaa
tccacctcagagcctgttttagaaaacggtcaggaaactagtgctcttgacacaagttct
gtggtacctatcaattcaaatgacatttcagaagatcatgcttctgctaccgctgtcggt
gccttaccttcacccaagagaattctagatatgtccgaatgccagcacaaaagaagcaag
cggacaaggaaatccaggagctgcgaatgctgtgatgaaaagctgtctccccaagtggaa
aagttgtcctctgaaccgaaaaaggcaagcactccagaaccaaagttaaaagaaccaagg
aagaaccttagtaaagtaaccgtggccctgactctgattcctgttgctgaagagattcat
tttgcacagaggctgaatgtagaaccttgtgcaacaagcaccccgctgccttttgttaag
gatgccgctgattggaaagaggccagcaatgttgctaaatctgtcagtggcgtcccaaga
aacaagtcaccaaacgtagaaccggaaaaattagcatgtgtccaaagtgaaaatgacaag
ccagttgcaggaattccggatgttcctttctctgaaacaatttcagaatccagatcaatg
gattctcaatcagaaatgctcagtgctcagggtcagcctttagaaccaggttcagtggat
tctcattcagaaatgcttagggctaaggatcaggatttagaaccaggtccaatggattct
cattcagaagaggtcagtgctaaggatcagcctttagaaccaggttcagtggattctcat
tcagaaatgctcagtgctaaggatcagcctttagaaccaggtccagtggattctcattca
gaagaggtcagtgctatggatcagcctttagaaccaggtcgaatggattctcattcagaa
gaggtcagtgctaaggatcagcctttagaatcaggttcagtggattctcattcagaagaa
agtgttatggatcagggtttagaaccagattcaatggattcctgttcagaagaaagtgtt
atggatcagggtttagaaccaggttcaatggattcccattcagaagaaagtgttatggat
cagggtttagaaccaggttcaatggattcccattcagaagaagtcagtgctaaggatcgg
ggtttagaaccagatgcagaagcagagactggaatggaagtctgtagtaaccaaaatggt
catttggaaagtgaaacagatacagagatcaaaattatccaagttgtgggagcacagcct
gaggaaagtgtcgttcagaatactgtagaagagactgcggtaacatctgccacacaggta
gcagagctgcaggaaaatgagacgagtgaggaagaaggagcagaagataatgcagcaaat
gcaccaagtcaaccttcaaccttagtcatgtggcagaacaaaattagtaccttggattct
ccaccaaaatgtaaagaacttgattttctttctttagccaaggtcagtggaagtcccact
gggacacaggctcgctgtctatggtccccatcagcttctccttctacaagtattttaaaa
agagccatcaaaagagaaccagaggaagattcgtcatcacctgcaaacaagaaccgaaga
gtctcctttgccaatccaatctaccaagaagaattggcagatgacattgaccggcgaagt
cctatacttagaattcatccttgcaataatggctctcaatcttcacgaagtgctaaatct
tcatctagtcatcaagccaagcttataaccactccaaccaaaggatctctgtcccctgga
acccgtagccataaatataagagctcaaagaagtgtttaatcacagaaatgggcaaggag
tcaacatcaccagtacctacagaaagcgtctatcctgccctgatgggctgtaaagcatct
gttgatataattctgcctcagattacttcaaatacttggacaagagggttagggcatctg
attcgagcaaagaatatcaggacggtgggtgacttgagttctctcaccgcagccgagatc
aaaacacttccaatccgttctcctagagttttaaatgttagaaaggttcttaaaggctat
catgagcaacaggtaaaatctcgtggaatggaggaaaatactggcctggacaatacagag
aaatcagaaatccatgtcatggatgacacatttttctcatcaaatgaaaatgcagaccaa
tgtgaacccgaggtctccagttcgggtgagtcatcagcaatagacctttggactcaggtt
aatctacttgctgaccaactttcttctgaaagacttcggaactattcagggaacgaactc
tttgaaatgcaagagaagcttcatagcatgacagactgcatcatgaaaactctgaagacc
cgttggatgctttcgagatcttgcgaaaccactgtttaa

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