Thamnophis sirtalis (common garter snake): 106539875
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Entry
106539875 CDS
T06107
Symbol
CALD1
Name
(RefSeq) caldesmon
KO
K12327
caldesmon
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106539875 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106539875 (CALD1)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
106539875 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
106539875
NCBI-ProteinID:
XP_013910263
UniProt:
A0A6I9X4I8
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLETERLSYQRNDDDDEEAARERRRRARQERLRQKEEDDLGQ
GIEKPEMNAQNNISEGESRSTSTVTTVTTTLGDGDDDAVFRERMARREERRQKRLQEALE
RQKELDPTVTDETISFTSKKVVNNVEENETPGKEEKVETHRRHYEVEETETITKSYQRNN
LQQDEEDEKKDEEYKEEMEDQKPKPQALEENQVELTVEKENIDNEEESAVLEGKHLEVNA
EGNKLDNGTHVLASSKEGLSMTIVIGENKEEDNEAEMNQIQIEERERLEREERERAEAEE
QRKAEEEKERLEAEKREAEEKAKREAEEKAKREAEEKTRLEAEERERVKAEEQRKAEEER
KRKEKEEAEKKKAAQEKERREAEERERRKAAEEKKAAEERERAKEKEKREAEERAKAEAK
AKLEEERLKAKQKAEEKKVDQLKGKKGDEKKIEEKQVKEKKLQEEKITAASLRKQGEENK
VEAKKGNLQEKKLQPAFRKEEVTITCG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggacgactttgaacgtcgcagagaacttaggagacaaaaacgggaggaaatgcggctg
gagacagaaagattatcctatcaaagaaatgatgatgatgatgaagaagctgcccgagag
cgacgcagacgagcccgtcaagaaagactgcggcaaaaagaagaggatgacttagggcaa
ggaattgagaaacctgaaatgaatgcccaaaataacatttcagaaggagagtccagaagt
acttctacagtgaccactgttacaaccactctaggtgatggagacgacgatgctgtgttc
cgggagaggatggcgcggagggaggaaaggcgtcaaaagcgtcttcaagaagcattggag
cgccaaaaggaacttgacccaactgttaccgatgagaccatatccttcacaagcaaaaaa
gtggtgaataatgtggaggaaaatgagaccccgggaaaagaagaaaaggtagaaacccac
agaagacactatgaggtggaggaaacagaaaccatcactaaatcgtaccagaggaacaac
ttgcagcaggatgaagaggatgaaaagaaagatgaggaatacaaagaagagatggaagac
cagaaaccaaagccacaagccctagaggagaatcaggtagaattaactgtagagaaggag
aatatagacaatgaggaggaatctgcagtcttggagggaaaacatcttgaggtaaatgca
gaggggaacaaattagacaatggcacccatgtccttgccagttcaaaggagggcctcagc
atgacaatagtcataggtgaaaataaggaggaagacaatgaggcagaaatgaaccagata
caaattgaggagagggaaaggctggagagggaagaaagggagagagccgaagctgaggaa
cagagaaaagcagaggaagaaaaagagagattggaagcagagaaaagagaagctgaggag
aaagcgaagagggaggctgaggagaaagcaaaaagggaagctgaggagaaaacaaggctt
gaggcagaggagcgggagagggtgaaggcagaagaacagcggaaggctgaggaggagaga
aagaggaaggagaaggaagaggcagagaagaaaaaagccgcccaggagaaagagagacgc
gaggctgaggagagggagaggaggaaggcagccgaagagaaaaaagcagcggaggaacga
gagagggctaaggagaaggagaagagggaggcggaggagagggccaaagctgaggcgaag
gctaagctagaagaggagaggttaaaggccaagcaaaaggccgaggagaaaaaggtagac
cagctgaaaggcaagaaaggggacgagaagaaaatagaagagaagcaggtaaaagagaag
aaactccaagaggagaaaatcacagcagcttccctcaggaaacagggggaagaaaataaa
gtggaagctaaaaaaggaaacctacaggagaagaagcttcagccagccttcaggaaagag
gaggtaactatcacttgcgggtag
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