Thamnophis sirtalis (common garter snake): 106539893
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Entry
106539893 CDS
T06107
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tsr01100
Metabolic pathways
Module
tsr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106539893 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106539893 (CHSY1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
106539893 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
106539893 (CHSY1)
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106539893 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
106539893
NCBI-ProteinID:
XP_013910285
UniProt:
A0A6I9Y0L8
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MAGRSRRSWLSVLLGLVLGFTLASRLILPRASELKNVGHRRRASMEGCKRRGGGGGLLLL
PNRDSRGALLWHPDPAQPRGRSPPAKNFLFVGVMTAQKYLETRAVAAYRTWSSTIPGKVE
FFSSEGSDMSLPIPIVSLPGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYVKG
DKLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPH
IGECLREMYTTHEDVEIGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIH
RAITLHPNKSPPYQYRLHSYMLSRKIAELRYRTIQLHREIVLMSKYSNTEVRREDLQLGI
APSFMRFQPQQREEVLEWEFLTGKYLYSMVDGQPPRRGMDSSQRQALDDVVMQVMEMINA
NAKTRGRIIDFKEIQYGYRRVSPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFS
KVQFMEPDEMDAKDLASKINQDSGSLSFLSNSLKMFVPFQLSKSKSEKTESKDQKINILI
PLSGRFDMFVHFMANFEKTCLIPNQNVKLVVLLFNSNSNPDKARQVELMREYRMKYPKAD
MQILPVSGDFSRALALEVGSSQFNNRSLLFFCDVDLVFTAEFLQRCRANTMIGQQIYFPI
IFSQYDPKIVYSGKVPSENHYAFTQKTGFWRNYGFGIACIYKEDLIRAGGFDVSIQGWGL
EDVDLFNKVILSGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLA
ELWLQKHEPNFGKNTVANGSLRTA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagaagccgccgctcctggctcagcgtcttgctcggtctggtgctgggcttc
accctggcttcccggctcatcctgccccgcgcttcggagctgaagaacgtgggacaccgg
cgccgcgccagcatggagggttgcaagaggcgagggggcggcggcggcttgctgcttctg
cccaaccgggactcccgaggggccctcctttggcacccggaccctgcccagcctcggggc
cggagccccccggccaagaacttcctcttcgtcggggtcatgacagcccagaaatacctg
gagacccgagccgtggcagcctacagaacgtggtccagcacaatccctgggaaggtggag
tttttttccagcgagggctcagatatgtctctcccgatccccattgtgtcgctacctggc
gttgatgactcttacccaccgcagaagaaatcgttcatgatgctcaagtacatgcatgac
cactatttggacaaatacgaatggttcatgcgagcggatgatgacgtctatgtgaaagga
gacaaactggagaacttcctgcggagtttgaatagcagcgagcccctcttcctagggcag
accggactaggcacgactgaagaaatggggaaactggccctggagcccggagagaacttc
tgcatggggggtccaggagtaatcatgagccgagaagtgcttcggagaatggtccctcac
attggggaatgccttcgagagatgtacaccactcatgaggacgtggagatcggcagatgc
gtacggagatttgcaggagtgcagtgtgtctggtcttacgagatgcagcagctcttttat
gaaaactatgagcagaacaaaaaaggttacatcagagacctgcacaacagcaagatccac
cgtgccatcactttgcatccgaacaaaagtccaccttaccaataccggcttcacagctac
atgctgagtcgtaaaatagcagagctacgataccggaccattcagctgcaccgcgagatt
gtcctcatgagcaaatacagcaataccgaagtacgtcgagaggaccttcagctgggaatc
gcaccgtccttcatgcgattccaaccacaacagcgcgaggaggttttggagtgggaattc
ctgacggggaagtacctgtactctatggtagacgggcagccgcctcgccgaggcatggac
tcctcccagcgtcaggccttggacgatgttgtgatgcaagtcatggagatgatcaatgcc
aacgccaagactaggggacggattatcgactttaaggagatacagtacggctatcgaaga
gtgagtcccatgtacggggccgagtacgtccttgacttgctccttttgtacaaaaagcac
aaggggaagaaaatgaccgtccctgtccggcgacatgcctacctacaacagaccttcagc
aaagtccagtttatggagcctgatgaaatggatgccaaagacctggccagcaaaatcaac
caggattcaggatccttgtcttttctctccaattctcttaagatgttcgtcccgttccag
ttgagcaagtccaaatctgagaagacggaatccaaagaccaaaagatcaacatcttaatc
cctctttcgggacgcttcgatatgtttgtgcacttcatggccaactttgaaaagacctgc
cttattcctaatcagaatgtcaaattggttgtcttgctattcaactccaactccaatccc
gataaggcacgtcaggtggaactgatgagagagtatcgtatgaagtaccccaaggctgac
atgcagattttacccgtttctggagatttttcccgtgctctggccctcgaagtcggatct
tctcagtttaacaatcggtccctgctcttcttttgtgacgttgacttggttttcactgcc
gagttcctccaacggtgtagagccaacacaatgatagggcaacagatttattttccgatc
atctttagccagtatgatccaaagattgtctatagcggaaaagttccgagtgagaatcac
tatgctttcacgcagaaaactggtttctggaggaactacggtttcggaatagcttgcatt
tacaaggaggatttaattcgggcaggggggtttgatgtttctattcagggctggggtctt
gaggatgtggatttgttcaacaaggtgattctatctgggctcaagacgttcaggagccaa
gaagttggtgtagtccatgtacatcacccggtcttttgtgacccaaacctggatccaaag
caatataaaatgtgtttgggctcgaaagcatcaacgtacggttctacgcagcaactcgct
gagctgtggcttcagaaacatgaaccaaattttgggaagaacacagttgctaatggttcc
ttgaggacagcttaa
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