Thamnophis sirtalis (common garter snake): 106539907
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Entry
106539907 CDS
T06107
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106539907 (RP1L1)
04812 Cytoskeleton proteins [BR:
tsr04812
]
106539907 (RP1L1)
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106539907 (RP1L1)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
106539907 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
106539907
NCBI-ProteinID:
XP_013910304
UniProt:
A0A6I9X4L9
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MRFSLSSEKSYMNGPATSSDNGNSSSNNCPKGEGLAPSLVNDDIEKKVYMNKDGSLSVEM
KVCFHLLSDETLQWSTQIKKSSLMNQTLCEESDVMEDNQSVPREKINQETSSEIEDSLYP
CDADSYISTLDESENEVTYCHCCSKSHSNYDIWKNPMHASQKEEPGVTNTWYTHSSCSST
SSHQRIVHKKRASIESVHTSSNETKHSEHLIQEISDFSETLGNKRENGRIKKCCCQDNCM
QTSKSQKELSEKTDSVASLASSESEHGSIMRKERDESRRTRARSNKSECQYSIESQIKVL
EETSSVVRTISSCSIKEREEVIGCSSSPNSASSKSGKDSTFGTKDKVEKISDNDHTPSYN
KISFSSEDSPPKIATQVEVEKEEEDNEINSVSEKMVSNGLIKDEVHRCSKRSKTRVSQTK
VCNEEGRSDSSEMDIHSAALSASRISNRSKGNQYDSKEDFKVSSGSSRGSIIKRKKTKRP
LHVEDGKSSSGTTSSSENSNEVGKRDKEGHLSHNSSHSNTSYLSEAAPNSEENSSRISKC
SSKSSRSSHKRIQREDTDVSSSISNVLESDEKNGTDTAKNSTQENISGQGSSSELMCSKC
GHVAETRSNYLQCGSSSNLVHSDAKSTCSEMQASENNDVSSQSSIAPSSKPRQKKRSNAT
LKYCSQVSEKASTTQFNFHSPVPPRGRPSSKNSRSLLMNINSAPASNELEPTADELQKEM
DGSQLPEMDTANEAEEKEGSGHKEKQTEEETVVQAEAASETCDQIIPSSLPNASPEEVVH
EWLRKIPSESLLMKCEMEKDEETIELHGEIPNCSNNQDSLEKGCSEKEDAEDGKHLAEND
CPQDEKASEIISEEVETSQGEGQYSDTPSQNNHKKDLPSTIQISVKIMKVLLASKHETKL
ERSYSLPEVSPTLGKKLSNSANILIQCLASLQLLDEALDSSNKQNKCLNGFRYKELLNIF
QAVWFGNILENGDANLGLQGKSQIKTSSSFKAPNSKDGDFTTMTSSGIDINSGDGGSGED
SGVGGHDCALLKEKRDKAKLPEEGKPEQEDGNEEEPEEHFQPLCSKLESESEAELAGVQE
VIEAKEDQDLENNIELDRNSTHDDQNVEDAENVSNEDNILMEAHTDTMAKEVEENPSEEA
GNNETEPGPSVNEAIDEKEAKINSENQSETTDDTATSNISHQSTVKVSPTIQQRSSSQDP
VWVLKLLKKIEKEFMTHYVSAMNEFKVKWNLTNSKELDLMIEELKEEVSRRIQKSVEEEL
NKIKSRTGKTIPKPPENELRQESTPQLENRRRRLTSMFSLNNESRNSNKQLKSGNIDNDN
FFNNTIQEDETFDVQLKDEEYCPCDECMRKKMVAKTIHHTAEVMAKAPNPVLKAFDLQDI
LNMKNTSVAHRKTDYDISEAEQEEEAQHEAKKMVENDGEEEAKCVEEMSLPPVDCQFTSS
YSNEQPVLPTVRTNAVTQVPPAKKITFYKSGDPQFAGIKMAINQRSFKSFNALMDDLSHK
IPLPFGVRAITTPRGIHFISTLDQLEDGGCYLCSDKKYVTPLNAGVANRKLGPQKVRQTD
SVLKRVVQDIKQEDYSMAFTQQSPRIPKKITLIKNGDITTQLPIILNRRNAQSFKVLLDE
ISEIMQFTVRKLYTIDGKRQEEGEQEEQEEGQQEEQEEGEQEQQEEEEEQEEEPEVEQQE
SVKGEGEENEEEEKPNIEDEEKEGESMREDEKKEAAKQEDEEKKEEEKEDEEQDEDMKVE
QDGEQEENDIICEENNQEMEAKSEEDKELNDEEEIDGEQKETPKDDQEAEDEPNVTDNSA
VEMDEKESQGDEPAENVGESQAIIEEEIPDSSEQKSENNASLGAKSEACSETAEVEEEDE
NKEGDEAGENEAEGEDSNESVQNPEDDRGTEENGTPEAPEKGSEGIFSQQSQEGSEYKSD
EDESKKKENISNEDGDCGSDGESKLDIESKPAKMYPDSNEEEEEDQSSQASFVMGEDPPN
EDNEDSHCVSKKKKQDSNIIDQDDLDF
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttcgctatcatctgaaaaatcttacatgaatggtccagcaacatcatcagac
aatggaaactcctcttcaaacaattgtcctaaaggagagggtttggccccttccttagtc
aatgatgacatagaaaagaaagtgtatatgaataaagatggcagcctatcagttgaaatg
aaagtctgctttcatctgctctctgatgagactcttcaatggtccacacaaatcaagaaa
tccagcttgatgaatcagactctctgtgaagaatcagatgtcatggaagataatcaaagt
gtgccaagagaaaaaattaaccaagagactagctctgaaatagaagactcattatatcct
tgtgatgctgactcttacatttcaactctcgatgaatctgaaaacgaggtgacctattgc
cattgttgcagtaagtcccacagcaactatgatatttggaagaaccccatgcatgcttct
caaaaagaagagccaggagtaacaaacacttggtacacacactcttcttgctcaagcact
tcatcacaccagagaattgtccacaaaaagagagcctccattgagagtgtccatacgtca
tcaaatgaaacaaaacattctgaacacctcatacaagagatttcagatttctcagagact
cttgggaataaaagggagaacggcagaataaagaaatgctgctgtcaagataactgtatg
caaacaagcaaaagccaaaaagagctatcagagaaaacagatagtgtagctagcttggcc
agttcagaaagtgaacatggttccatcatgaggaaagaaagagatgaaagtagaagaact
agagctaggagtaacaaatcagaatgtcagtattctatagaaagccagataaaagtgtta
gaggaaacaagtagtgtggtaaggacaatttcatcctgtagcattaaggaaagagaagaa
gttattggctgttcatcttctccaaatagtgccagtagcaaatccggtaaagatagtaca
tttggaacaaaagacaaagtagaaaagatttcagataatgatcacacaccatcatataat
aaaatatcattttcaagtgaagattccccccctaaaattgccacacaagtagaggttgaa
aaggaagaggaggataatgaaataaattcagtttcagaaaagatggtgtccaatggtctt
atcaaggatgaagtccatagatgtagcaaaaggtctaagaccagagtctcccagaccaaa
gtttgtaatgaagaaggtagaagtgatagcagtgaaatggatatccatagtgctgcttta
tctgcctccagaatctccaatagaagcaagggcaaccaatatgactcaaaagaagacttc
aaagtatctagtgggtcaagcagaggatctattatcaagagaaagaaaaccaaaagacct
ttacatgtagaggatggaaaatcaagcagcgggacaacctcttcttcagaaaactcaaat
gaagtagggaaaagagacaaagagggtcatttatctcataattcttctcattcaaatacg
tcatatttaagtgaagcagctcccaacagtgaggaaaattccagcaggatatctaaatgc
tctagtaagtcctccagaagtagtcataaaaggatccagagagaagataccgatgtatca
tcttctatttccaatgttttggaatctgatgagaaaaatgggaccgatactgccaaaaat
agtacccaggaaaacatttccgggcaaggaagtagctcagaattgatgtgctccaaatgt
ggccacgtagcagaaaccagaagcaattatcttcaatgtggtagttcaagcaacttggta
cattctgatgccaagagcacttgttcggagatgcaagcctcagagaataatgatgtcagc
tcgcaatcaagcatagcaccatcttccaaaccaagacaaaaaaagagaagcaatgctacc
ctgaaatattgtagccaagtttcagaaaaagcatctacaacccagttcaatttccactcc
cctgtcccccccagagggagacccagcagcaagaacagtcggtctctgctgatgaacatc
aacagtgcccctgcgagcaatgaattggagccaacggcagatgaactgcaaaaagaaatg
gatggttcacagttgcctgaaatggacacagcaaatgaggcagaggaaaaggaaggctct
ggccacaaggaaaagcaaacagaggaagagacagtggtccaagcagaagctgcttcagaa
acttgtgaccaaatcatcccatcttcacttcccaatgcctctccagaagaagtcgtgcat
gagtggttgagaaagatcccttcagaatctctgctgatgaaatgtgagatggagaaagat
gaggagacaattgaattacatggtgaaattcccaactgttcaaacaaccaggattcattg
gaaaagggatgtagtgagaaggaagatgcagaagatggtaaacacctagcagaaaatgat
tgtccccaggacgagaaggcttctgaaattatatcagaagaagtggaaactagccaagga
gagggccagtattctgacacccccagccaaaacaaccacaaaaaagacttgcccagcacc
attcaaatctctgtgaagattatgaaagtgttgctggcttccaaacacgaaacaaaattg
gaacggtcctatagtttgcctgaagtgtctcctacattaggaaaaaaactcagcaactca
gccaatattttgatacaatgccttgcttccctacagctcctggatgaagcattggattca
tccaataaacaaaataaatgcctgaatgggttcagatacaaagaactcttaaacattttc
caggcagtgtggtttggaaacatacttgaaaatggggatgccaatttagggctgcaagga
aaaagccagataaaaacgtcttcaagtttcaaggcccctaattcaaaagatggtgacttt
acaacaatgacctcttcggggattgatataaatagtggtgatggaggttcgggagaagac
agcggtgttggtggccatgattgtgccttgttaaaagagaaaagagataaagccaaactc
cctgaagaaggaaaaccagagcaggaagatggtaatgaggaggagccagaggaacatttt
cagccactttgttcaaaactggaaagtgaaagtgaagcagaacttgctggagttcaggag
gtaatagaggcaaaggaagaccaggatcttgagaacaatattgaattggacagaaatagt
acacatgatgatcaaaatgtggaggatgcagagaatgtctctaatgaagataacatcctg
atggaggctcatacagacaccatggccaaagaagtagaagaaaatcccagtgaagaggca
ggcaacaatgagacagaacctggcccaagtgtaaatgaggctattgatgagaaagaggcc
aagatcaattcagaaaaccagtctgagactacagatgatacagcaactagtaacatatct
catcaaagcacagtgaaagtttctccaacgatccaacaaagatccagcagccaggaccca
gtttgggtgctaaaacttctgaagaagatcgagaaggaattcatgactcactatgtcagt
gccatgaatgagttcaaagtgaaatggaacctgacaaacagtaaagagttggatttgatg
attgaagaactgaaagaagaagtgagcagaaggatacaaaagagtgtggaagaagaacta
aataaaatcaaaagcagaacaggaaagacgattccaaaacctccagaaaatgaattaagg
caagaatctactccacaactagaaaaccggaggcgccgtttgacgagtatgttctcactc
aataacgagagcagaaattcaaataagcaactgaaatcagggaacattgacaacgataac
ttctttaataatacaattcaagaagatgaaacatttgatgttcagctaaaagatgaagag
tattgcccctgcgatgagtgtatgaggaaaaaaatggtggccaagactatacatcataca
gctgaagtgatggctaaggctccaaacccagtcttgaaggcttttgatctacaagacatc
cttaacatgaagaacaccagtgttgctcataggaagacagactatgatattagtgaagca
gagcaggaagaagaagcccaacatgaagcaaaaaaaatggtggaaaatgatggggaggag
gaagcaaaatgtgtggaggagatgagcctaccacctgttgattgtcagttcaccagttct
tatagcaatgagcaaccagttcttccaacagttcgtacaaatgctgtcacccaggtgcct
ccagccaagaaaataacgttctacaaaagtggggacccacagtttgcaggaatcaagatg
gccatcaatcaacgcagtttcaaaagtttcaatgctctcatggatgatctttcccacaag
attcccttgccttttggggtacgggccatcacaaccccacgggggatacacttcatcagc
acattggatcagctggaggatggagggtgctatctttgttcagataagaaatatgtcaca
cctcttaacgctggtgttgccaaccggaagttgggtccccaaaaggttagacagacagac
agtgttctcaagagagtagttcaagatatcaaacaagaagattactcaatggctttcacc
caacagagtccaaggatacccaagaaaatcactctgatcaaaaatggagatattacaaca
cagttgccaattatcctgaaccgtcgaaatgcacaaagcttcaaagttctcttggatgaa
atttcagaaattatgcaattcacagtgaggaagctgtacacaatagatgggaaacggcag
gaagagggtgagcaggaggagcaggaggaggggcagcaggaggaacaggaagagggggag
caagagcagcaggaggaggaggaagagcaggaggaagagccagaagtggagcagcaggag
tctgtgaaaggagaaggggaggagaacgaagaggaggaaaaacccaacatagaagatgaa
gaaaaggaaggagagtctatgagagaagatgaaaaaaaggaagcagcaaaacaagaagat
gaagaaaaaaaagaggaagaaaaagaggatgaagaacaggatgaggacatgaaagtagaa
caagatggagaacaggaagaaaatgatataatatgtgaagaaaataatcaggaaatggaa
gccaaaagtgaagaagataaagaattgaatgatgaagaggagattgatggagaacaaaaa
gaaaccccaaaagatgaccaagaagctgaagatgaacctaatgtgacagataatagtgca
gtagaaatggatgaaaaagaaagccaaggagatgaacctgcagaaaatgttggtgaatct
caggccattattgaggaagagattcctgatagtagtgaacagaaatctgagaacaatgcc
agtttgggggcaaaaagtgaggcatgttcagaaacagcagaagttgaagaagaggatgaa
aataaggagggtgatgaagctggagagaatgaagcagaaggagaagatagcaatgaatct
gttcagaacccagaagatgacagaggaacagaagagaatgggactcctgaagcaccagag
aaaggatctgaggggattttttcacagcagtctcaggaaggatctgaatataaaagtgat
gaagatgagtctaagaaaaaggagaatattagtaatgaggatggtgactgtggaagtgat
ggggaatctaaattggatatcgagagtaagcctgcaaagatgtatccagacagtaatgaa
gaggaggaagaagaccaatcatctcaggcaagttttgtgatgggagaagatcccccaaat
gaagacaatgaagatagtcattgtgtctctaaaaagaagaagcaggactcaaatattatt
gatcaagatgatctggacttttaa
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integrated database retrieval system
