Thamnophis sirtalis (common garter snake): 106539916
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Entry
106539916 CDS
T06107
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106539916 (TRPC1)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106539916 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
DUF2157
Motif
Other DBs
NCBI-GeneID:
106539916
NCBI-ProteinID:
XP_013910315
UniProt:
A0A6I9Y0P6
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDFYMVKKLLEENNS
GDMNINCVDVLGRNAITISIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERMQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLRELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLREERMNLSRLKL
AIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGILWPLLSFSYLLAP
RSQIGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKIVAHKKFHDFAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVHEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFN
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTQPPPFNIIPAPKTICYIFNSLSKWISSHTSSGKVKRQNSLKEWKSLKQKRDENYQ
KVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAIFYQR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctataccagagtgcagacccatcggcctcggcttccccgaacaagctgctg
gcgttgaaggacgtccggcaggtgaaggaggagaccaccctggacgagaaactgttcctg
ctggcttgcgacaaaggtgatttttacatggtgaagaaacttttagaagagaataattct
ggtgacatgaacataaattgtgtggatgtacttgggagaaatgctattaccataagtatt
gaaaatgagaatctagacattctacagcttctgttggattatggctgtcagtctacagat
gcattattggtggccattgattcagaagttgtgggagctgttgatatattacttaatcat
cgaccaaagcgatccagtagaccaacaattgttaaattaatggaacgtatgcagaatcca
gaatactcaacaactatggatgtggcacctgtcattttagctgctcaccgtaacaactat
gaaattcttacaatgctcttaaaacaggatgtttcgctacccaaacctcatgctgtgggg
tgtgaatgtacattgtgtacagccaagaacaaaaaagatagtttacgtcactccagattt
cgtcttgatatttatcgatgtttggctagtcctgccttaataatgttgacagaagaggat
ccaattctgagagcctttgaacttagtgcggatttaagagaattaagccttgtagaagtt
gaattcagaaatgattatgaggaactggctcagcagtgcaaaacctttgctaaagatttg
cttgctcaagcacggaattcccgggagcttgaagttatattgaatcatactgcaagtgat
gaacatgtggataaacgaggattacgagaagagagaatgaatttgagtcgcctaaagctt
gccattaagtataaccaaaaggaatttgtctcccaatctaattgccagcagtttctcaat
actgtctggtttggacaaatggctggttatcgccgcaagcatacatttaagaagattttg
acagtcttgacagttggcatcctttggcctctactatctttttcttacttattggcacca
agatctcaaataggcagaataattcatactccttttatgaaatttatcattcatggagcc
tcttattttacatttctgttactacttaatttgtactcacttgtctacaatgaagataag
aaaaacacaatgggaccagcattagagagaatagactatcttctaatactgtggctcatt
ggaatggtatggtcagatgttaaaaggctttggtatgatggcttggaagactttttagaa
gaatcacgaaatcaacttagttttgtcatgaattctttgtatttggcaacttttgctctc
aaaatagttgcccataagaagttccatgattttgctgagaggaaggattgggatgctttc
catcctacacttgtggctgaaggactctttgcttttgctaatgttctcagttatctccga
ctattcttcatgtatacaacaagctccatcctgggtccacttcagatttcaatggggcag
atgttgcaagattttggcaaatttcttggtatgttccttttggtattgttctcattcact
attggattgactcaactttatgataaaggattcactgtccatgaagagaaggactgtgct
ggaattttttgtgagcagcaaagcaatgacacattccattcgtttattggcacctgcttt
gctctgttttggtatatattctcccttgcacatgtagctatatttgtcaccagatttaat
tatggtgaagaattgcagtcttttgtgggcgctgttattgttggcacatataatgtagta
gttgtgattgttcttaccaagcttttagtggcgatgcttcataaaagttttcagctaata
gcaaatcatgaagataaggaatggaagtttgctcgtgcgaagctctggcttagctatttc
gatgataaatgcacgcaacctccacctttcaatattattcctgctcccaaaacaatctgc
tacatatttaatagtctcagtaaatggatttcttctcacacgtcatcaggcaaagttaag
cggcagaacagtttaaaggagtggaaaagtttgaagcaaaagagagatgaaaattaccaa
aaggtgatgtgttgtttagtccatcgttacttgacttccatgagacagagaatgcaaagt
actgatcaggcaacagtagaaaacctgaatgaactgagacaagatttatcaaaattccga
aatgaaataagagacttgcttggttttcggacatcaaaatatgccatattttatcaaaga
aactaa
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