Thamnophis sirtalis (common garter snake): 106539988
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Entry
106539988 CDS
T06107
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106539988 (DDX17)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106539988 (DDX17)
Spliceosome [BR:
tsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106539988 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106539988
NCBI-ProteinID:
XP_013910413
UniProt:
A0A6I9XHB5
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGSPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLS
PYEVEELRRKKEITVRGTDGCPKPVFNFHQCNFPQYVMDVLMDQHFTEPTPIQCQGFPLA
LSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVAD
DYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLD
EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQINVGNLELS
ANHNILQIVDVCMENEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPA
MCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR
IGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRS
RYRTSNSSNNPNLMYQEECERRLRGVKDGRRDSSNFRDRDRTDSFANGANKAYGSAYGNA
TSAFGAQQSQYGYAQGAYGTATYGTSGYGAEYGAAGYGAASTANAGRNSQSTSQQPYAGL
GRSGQQPQPLMSQQFPQPPGTSVMGYMGQTASYQYPPPPPPPPPSRK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcttcggtgaccgaggccgcgatcgtgaccgcggcgggtttggtagccctctg
cctcctaaaaaatttggaaatccaggagagcgtttgcgaaagaagaagtgggacttgaat
gaattacccaaatttgagaaaaacttttatgttgagcatccggaagtagcaagactcagt
ccttatgaagttgaagagttgagaagaaagaaagagattactgtaagagggacagatggt
tgccccaagccagtatttaactttcatcagtgtaactttccacaatatgtaatggatgtc
ttgatggaccaacattttactgaaccaactccaattcagtgtcagggctttcctttggcc
cttagtgggcgtgatatggtgggcattgcacagactggctctgggaaaacattggcatat
ttgctacctgcaattgttcatattaatcaccaaccatacttggaaaggggagatggtcca
atttgtttagttttagctcctacccgagaactggcccaacaagtccaacaagtagctgat
gattatggtaaatgttcaagactgaagagtacctgtatatatggaggagcacccaaaggc
ccccagattagagacttagaaagaggtgttgaaatttgtattgctacccccggccgtctg
attgatttcctggaagcagggaaaactaatcttcgccgctgtacatatcttgtattggat
gaagctgatagaatgctggatatgggttttgaacctcagattcgtaaaattgttgatcag
atacggcctgataggcaaacactcatgtggagtgccacttggccaaaggaggtgcgccag
ctggctgaggacttcctgcatgattatgtccagatcaatgtggggaatttagagctgagt
gccaatcataatatcctgcagatagtggatgtgtgcatggagaacgagaaggatcataaa
ttaatacagctgatggaagaaattatggctgaaaaagagaataagactattatctttgtg
gaaacaaaaaggcgatgtgatgacctaacacgaaggatgcgtagagatggttggccagct
atgtgtattcatggagacaaaagtcagcctgaacgagattgggtgcttaatgaatttcgt
tctggaaaggctcctatcctcattgccacagatgttgcatctcgtgggctagatgtggaa
gatgtgaagtttgtgataaactacgactatccaaacagttcagaggattatgtgcataga
attggccgtactgcccgtagtaccaacaaaggcactgcctatacattcttcacaccagga
aatctgaaacaggctagagagttaataaaagttctagaagaagccaatcaagccatcaat
ccaaaactgatgcagcttgtggaccacagaggtggtggtggtggaggaggtggtcgttct
cgttaccgtacaagcaattcatccaacaatcctaatttgatgtaccaggaagagtgtgag
cgaaggctccggggagttaaggatggccgaagagactcaagtaatttccgagaccgtgat
cgcactgacagttttgccaatggagccaacaaagcctatggtagtgcttacggaaatgca
acttctgcatttggggcacagcaaagccaatatggatatgcccagggagcctatggaact
gcaacttatggaacaagtggttatggggcagaatatggtgctgctgggtatggggcagcc
agcactgctaatgctgggagaaactcacaaagcaccagccaacagccatatgcagggctg
ggccgttcaggccagcagccacagcctctcatgtcgcaacagtttcctcagcctcctggc
accagtgtgatgggctatatggggcagactgccagctatcagtatcctccacccccaccc
ccacctcctccttcacgcaaatga
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integrated database retrieval system
