Thamnophis sirtalis (common garter snake): 106540007
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Entry
106540007 CDS
T06107
Symbol
GPNMB
Name
(RefSeq) transmembrane glycoprotein NMB isoform X1
KO
K20732
transmembrane glycoprotein NMB
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106540007 (GPNMB)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Others
106540007 (GPNMB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMEL_NMB_N
PKAT_KLD
PKD_4
PKD
NicO
DUF7322
Motif
Other DBs
NCBI-GeneID:
106540007
NCBI-ProteinID:
XP_013910448
UniProt:
A0A6I9XHF0
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MQPNNLCGDILDVLSSMKPDAYWEYLEMTQVTEDPSGHDKTNHLITKMKWTCLFFLLGCL
FVGEHVLSATASKLFRDVMTHRTAYSHNKHNHRLDHWYSDRNNWNDKLYPIWEKGDSRWK
NCWKGGRVVASLTSDSPALIGSNVTFIAKLKFPRCQKEDNDSNIIYDRMCLNNSSVLSDE
YVYNWTQWIDDCSWVNCTHNNSYNVFPDGKSFPYHHGWRRRNYIFIFHTLGQYYQIKGGS
SVMISINTTNITVGKQMMELAVYRRGYRSFVPVTTSNAIYVVTDQIPFYVNISQKNNRNI
SDFIFIKDIPIMFDVRIHDPSHYLNHSAISYHWNFGDGSGSFVSNNSISTHTYTLLGNFS
ADLSVQAIIPVPCGPVTVSPLSTFPAFTTQLPSNTTSTSPNVTEAPTGQPPVERCSITRY
GTYKATLTIVDGILEVNIIQMTSVQMTATQVGSSVVDFVVTCQGSLPTDACTLIADPTCT
ILQSESCHPVDVADICFLTIRRAFNESGTYCVNITLADATSLALTSTVISINGDEASFSR
TAEGILVTGGFLVVLGSLLIFFLYKRYKEYKPIERKTGQGKSSEGLSVYFNNVKAVLFPR
GNERDPLLKSKPGIV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctaataatttgtgtggtgacatactagatgtgttatccagcatgaagcctgat
gcctattgggaatatctggagatgacacaagttacagaggacccgtctggacatgacaaa
acaaatcatttgataacaaagatgaagtggacttgcctattctttctccttggatgcctg
tttgttggtgaacatgttctgagtgctacagcttccaaactatttagagatgtgatgact
catagaacagcatattctcataacaagcacaaccacaggctggatcattggtattctgat
cgtaataactggaatgataagctttatcctatctgggagaaaggagactccagatggaaa
aactgctggaaagggggaagagtagtagctagtttgacctctgatagcccagctcttata
ggatctaatgtgacatttattgcaaaactaaaatttcccagatgtcagaaggaagataat
gacagcaatataatatatgatcgaatgtgcctaaataattcttcagttctttctgatgaa
tatgtttataattggacccagtggattgatgactgtagctgggtaaattgtacacataac
aacagctataatgttttcccagacggaaaatcttttccttatcaccatggatggaggaga
aggaattacatctttatatttcacacacttggacaatattatcaaataaaaggaggttca
tcagttatgatatcaatcaacacaacaaatatcactgttggtaaacaaatgatggagttg
gccgtttacagaagaggttatcgctcatttgtacctgtaaccacatcaaatgctatttat
gttgtaactgatcaaatccccttctatgtgaatatatcacagaagaacaatcgcaatatt
tcagactttatcttcatcaaggatatccccattatgtttgatgttcggattcatgatccc
agccactatttgaaccattctgctatttcttatcactggaattttggagatggtagtggg
tcatttgtttccaacaattctatttcaacacatacatacacacttctgggaaatttcagt
gctgacttatctgttcaagctattatacctgtaccttgtggaccagtgacagtttctcct
ttatctacatttccagcattcactacgcagttgccttctaatacaacttccacctcccct
aacgtaaccgaggcgcccacaggacaacctcctgttgaaaggtgcagtatcactcgatat
ggaacttacaaagcaacacttaccattgtagatgggatccttgaggtaaatattatccaa
atgacaagtgtccagatgacagctactcaagttggaagttccgtggttgatttcgtagta
acctgtcaagggagtctacctacagatgcctgtacattaattgctgatcccacatgtacg
attttacagagtgagtcatgtcaccccgttgatgttgccgatatatgtttcctaaccata
agaagagccttcaatgaatctggaacctattgtgtcaacatcacactggctgatgcaaca
agtctagcactcacaagtactgtgatctctatcaatggagatgaagcatccttttcaaga
acagcagaaggaattctggttacaggtggtttcttggtggtgcttggtagtttactgatt
ttcttcctttacaagagatataaagaatataaacctattgaaagaaaaacaggtcaaggg
aaatccagcgaaggactaagcgtttacttcaataatgtcaaggctgttcttttcccaaga
ggcaatgagagagaccctctgctgaaaagcaagccgggaattgtctaa
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