Thamnophis sirtalis (common garter snake): 106540019
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Entry
106540019 CDS
T06107
Symbol
NUP155
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106540019 (NUP155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106540019 (NUP155)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106540019 (NUP155)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
106540019
NCBI-ProteinID:
XP_013910458
UniProt:
A0A6I9XHG0
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MSDMDYPLQGPGFLSIPCLPEISSIRRVPLPHELVEQFGHMQCNCMMGVFPEISRAWLTI
DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHIRHLLVLATPVDIVILGLS
YTTLQAGTGTLNDSMSGGMQLLPDPLYSLPTDNTYLLTITSAENGRIFMSGKDGCLYEVA
YQAEAGWFSQRCRKINHSKSTLSFLVPSLLQFTFSEDDPVVQIAIDNSRNILYTRSEKGV
IQVYDLGSDGQGMVRVASVSQNAIVSAAGRVARTIDRSVFKPIVQIAVIENSESIDCQLL
AVSHAGVRMYFSVCPFKHPFARPSTLTLIHIRLPPGFSAASNVEKPSKVHRALYSKGILL
MAASENEDNDILWCINHDSFPFQKPMMETQTKTAVDGHSWALAAIDEQNVPKIVTPLNKE
LIPITDSPMVVQQHMLPPKKFVLLSAQGSFMFHKLRPVDQLRHLFVCNAGGDGEDIERFF
KLHPVEQACATCLILACSSAACDREVSGWATRAFFRYGGEAQMRFPSSLPPPSNVGTTLG
SPLLPGSPLPAGSPYSNPSFLATPAQGLQPPTMSTPIYPAVGHMTQPGASISGMMCPEIV
YSGKHNGVCLYFSRIIGNIWDGSIVVERVFKSGNREVVAVESSVPPQLLESVLQELKGLQ
EFLDRNSHFATIGSLRNPSFINPATLQQRLLGVMQYEVGSSQQMQQEVQRKFHAEAQLSE
KASLQSIQQLVRKTCQALALWKLLCEHQFNIIIGELPKEFQEHLKITTFRDLVIRDKELT
GAVIASLINCYIRDHAAVDGISSHLQDICPLLYSTDDAICSKANELLQRSRQVQNKSEKD
KMLRESLKEYQKISTQVDLANVCVQYRQVRFYEGVVELSLTAAEKKDPQGLGLHYYKNHE
PEEDVTGWQAFQERLNCYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNE
EAGHHFEQMLKLAQRSTDELFSIALYGWLIQADLSDKLLQVNSPFLEPYLARMAKIDQNK
VRYMDLLWRFFEKNRSFSNAARVLAKLADMHSTEISLQQRLEYIARAILSAKSSTAISPI
AADGEFLHELEEKMEVARIQFQIQEVLHHQCSHHSSVQDAVSQLDSELMEISKLYGEFAD
PFKLSECKLAIIHCAGHSDPILVQTLWQEIIEKALSDSLAMSAPDRMQSLSLKMVTLGKI
YAGTPRYFPLDFLVQYLEQQVCSLNWDVGFVTYTMQEIGVPLPRLLEVYDQLFKARDPYW
SKMKKPLHLLECIHVLLSGYVQDPNKVATFERRRFTNICLDAVSRYLVELQSISPTLAVQ
TITGSFKSLQAKLERLH
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatggattatccattacagggacctggctttctttcaattccctgccttcca
gaaataagctcaattcgaagagttcctttaccccatgaacttgttgagcaatttggacat
atgcagtgtaattgtatgatgggagtgtttcctgagatcagtagggcatggctgaccatc
gatagtgacatctttatgtggaattatgaagatgggggagaccttgcttattttgatggt
ctcagtgaaaccattcttgcagttggattggtgaaaccaaaagcaggcatctttcagcca
catatacggcacttgctggttttagctactcctgtggatatagtaattttaggactcagc
tatactaccttgcaagcaggcactggaaccctgaatgatagcatgtctggtggaatgcag
cttctccctgaccccctttactcacttcctactgataacacctatctgctgactataacc
tctgctgaaaatgggcgcatttttatgtctggcaaggatggttgtctgtatgaagttgct
taccaggcagaagcaggctggttcagtcagcgctgtaggaagatcaatcactcgaagagc
actctttcttttcttgttccatctttactgcagttcacattttcagaagatgaccccgtt
gttcaaatagccattgacaactcccgaaacattttatatacacgctctgaaaaaggggtg
atacaggtttatgatttaggttccgatggccaagggatggtgagagttgcttctgtttct
cagaatgctattgtgtctgcagctggaagggttgccaggaccatcgaccgttctgtgttt
aaaccaattgtccagattgcagtgattgaaaattctgagtctatagattgtcagttactg
gcagtcagtcatgcaggtgtacggatgtattttagtgtatgtccatttaagcatcctttt
gctcggccttcaactttaacattgattcatatccgcctgcctccgggattttctgcagct
tctaatgtggaaaagccgtcaaaggttcaccgagctttatatagcaaaggtattctcctt
atggctgcttcagaaaatgaagataatgatatcctgtggtgtattaatcacgattctttc
cctttccaaaaaccaatgatggaaacccagacaaaaacagctgtcgatgggcattcttgg
gcacttgctgccatagatgaacaaaatgttcctaagattgtaacaccactgaacaaagaa
ttaattccaataacagattctcctatggttgtgcaacaacatatgttaccaccaaagaaa
tttgttctactgtcagcacaggggagttttatgtttcataaactcagaccagtggatcag
ctaagacatctctttgtgtgcaatgcaggaggggatggagaagatattgaaagatttttt
aaacttcatccagtagaacaagcttgtgctacttgcctaatccttgcctgctcttctgct
gcttgtgatagagaagtatctggctgggctactcgagcatttttcagatatggtggtgaa
gctcagatgcggttcccctctagtctgccacctccaagcaatgttgggacaacattaggc
tctcctctgctacctggttcacctctgcctgctggtagcccctactctaatccaagcttt
ttggcaacacccgcacaaggtttgcagcctcctaccatgtccactccaatatatcctgca
gttggtcatatgactcagcctggcgcttcaatcagtgggatgatgtgccctgagatcgta
tattctggaaagcacaatggtgtctgcttatacttttcccgaataataggaaacatttgg
gacggaagtatagttgtggagagagttttcaagagtggcaatcgagaagttgtagcggtt
gaaagcagtgttcccccacaactattagaatcagtgctacaggaattaaaagggctgcag
gaatttttggacaggaattcccattttgccacaataggatctcttagaaatcccagtttc
atcaacccagctaccctgcaacagcgtttacttggagtgatgcagtatgaggttggaagc
tctcaacaaatgcagcaagaagttcagaggaagtttcatgcagaagcacagttatctgag
aaagcttccctacaaagcatccaacagctggtgcggaaaacttgccaagcgctggctctg
tggaagcttctttgtgaacatcagttcaatattattataggtgaactaccaaaggagttt
caagaacatctgaagattactactttcagagacctcgtcattagagataaagaactaact
ggagccgttatcgcttcccttatcaactgctacatcagagaccatgctgctgtggatggc
atcagttcacatttacaagacatttgtccgctactgtacagcacagatgatgccatctgt
tctaaggcaaatgaactactgcaaaggtccagacaagttcagaacaagtcagaaaaagat
aaaatgttaagagagtcattgaaagaataccaaaaaattagcactcaggtggatcttgcc
aacgtctgtgtacagtataggcaagtgcgtttctatgagggtgtggtagaactttctctg
acagctgcagagaaaaaggatccccagggcctcggacttcattattacaaaaaccatgaa
ccagaagaggatgttactggctggcaggctttccaggagaggttaaattgttataaatgc
atcacagacacccttcaggagctggttaatcaaagcaaagctgcccctcagtctcccagt
gtgcccaagaaaccaggtcctcctgttttgtcctctgatcccaacatgctgagcaatgag
gaagcgggacatcattttgaacaaatgcttaaactggctcaacggtccaccgatgaactt
tttagtattgccctttatggctggttgattcaggctgatttatcagataaactgctgcag
gtaaactctcccttcctggagccatatttggcacgcatggccaaaattgatcaaaacaaa
gttcgctatatggatttgctatggagattttttgagaaaaatagaagttttagtaatgca
gcccgggtgctcgcaaaattggcagacatgcacagcactgagatttcgcttcagcagcgc
cttgaatatattgcccgtgccatcttgagtgctaagagctcaacagcgatatcgccaata
gctgcagatggggagtttttgcatgaattggaagagaaaatggaagttgccaggatacag
tttcaaatacaagaagtcttacaccatcagtgttctcatcattcttcagtgcaagatgca
gtttcccaattggattctgagttgatggaaattagcaagctctatggggaatttgcagat
cctttcaaactctctgagtgtaaattggccattatacattgtgctggacattcagatcct
atcttagtgcaaactctttggcaagaaataattgaaaaagcactgagtgacagtcttgca
atgagtgctcctgataggatgcagtctcttagtctgaagatggtaacgcttgggaagatt
tatgctggaacaccacgctatttccctttagatttcttagtacaatatctagaacagcaa
gtttgttctttgaactgggatgtgggatttgtaacttatacaatgcaagaaattggtgtc
ccactaccacggcttcttgaagtatatgatcagctctttaaagcacgggatccctactgg
agcaaaatgaagaaaccattacatcttttggaatgcatacatgtactgctatcaggatat
gtgcaagatcctaacaaagtagctacttttgaaagacggcgattcacaaatatctgctta
gatgctgttagccgttaccttgttgaattgcagtctataagtccgacactagctgtacag
accattacagggagctttaaatctctgcaagcgaaattagagcggcttcactaa
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