Thamnophis sirtalis (common garter snake): 106540057
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Entry
106540057 CDS
T06107
Symbol
CDH7
Name
(RefSeq) cadherin-7
KO
K06799
cadherin 7, type 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106540057 (CDH7)
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Major cadherins
106540057 (CDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106540057
NCBI-ProteinID:
XP_013910519
UniProt:
A0A6I9X548
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MKLGKVELCHFLQILALFLCLSGMSQAELPRSGSKPYFQPGRSRTKRSWVWNQFFVLEEY
MGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTL
RAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDA
DDPTYGNSARVVYSILQGQPYFSVEPKTGIIKTALPNMDREAKDQYLLVIQAKDMVGQNG
GLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPLASMVARLKAADADIGVNAEMEYK
IVDGDGLGVFKILVDKETQEGIIMIQKELDFETKTSYTLRIEAANKQVDARFLSLGPFND
VTTVKIIVEDVDEPPMFSSLSYSMVVSEAAKVGTIIGTVAAHDPDASNSPVRYSIDRNTD
LERYFNIDANTGVITTAKTLDRETNAVHNITVLAMESQNPSQIGRGYVAITILDINDNAP
EFAMDYETTVCENSEPGQIIQRISAIDRDEPPNGHQFSFSLVGDATNNHNFTLQDNKDNT
ATILTRRNGFRRQEQSVYYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGIAQTCNAEAYI
LPAGLSTGALIAILACVLTLLVLVLLIVSMRRRKKEPLILDEERDIRENIVRYDDEGGGE
EDTEAFDMAALRNLNVIRDTKIRRDVTPEIQFLSRPSFKSIPDNVIFREFIWERLKEADV
DPCAPPYDSLQTYAFEGNGSVAESLSSLDSVSSNSDQNYDYLSDWGPRFKRLADMYGTGP
ENLYS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaggcaaagtagagctctgccattttttgcagatactagctcttttcctctgt
ctttctgggatgagccaagcagaactgccaagatcgggatcaaagccctacttccaacct
gggagatcacgaaccaaacgcagttgggtgtggaatcagttctttgtcctggaggaatac
atgggaagcgatcctctttatgtaggaaagcttcactctgatgttgataaaggcgacggc
tccatcaaatacatcttgtcaggagagggggcaagttccattttcattattgatgagaac
acaggggatattcatgctacaaagaggcttgatcgggaagaacaggcctactacaccctc
cgtgcacaagcactagatagactgacaaataaacctgtggagcccgagtcggaattcgtc
attaagattcaggacatcaatgacaatgagcctaaatttctggatggtccttacactgcc
ggagtgcctgaaatgtctcctgtgggaacctctgtggtacaagtaacagcaaccgatgca
gatgaccctacatatggcaacagtgccagagtggtttacagcatcctccaaggtcagcct
tatttttctgtggaaccaaagacaggtattatcaagactgcacttcccaatatggacaga
gaagcaaaagaccaatatttgcttgtcattcaagccaaggatatggttggtcagaatggg
ggtctttctgggaccacatctgtcactgttaccctgactgatgtcaatgataatcctcca
cgatttccacgcagatcgtaccaatataatgttccagaatcacttcctttggcttcaatg
gtggctagattaaaggctgcagatgctgatataggggttaatgctgaaatggaatataag
attgtggatggtgatggcttgggtgttttcaaaattttagtggacaaggagacgcaagaa
ggaattattatgatacaaaaggagctggatttcgaaacaaagaccagctacacgctgaga
attgaagcagccaataagcaggtagatgcccgcttcttaagccttggaccattcaatgat
gtgacaacagtcaagattattgtggaggatgtagacgagccacccatgtttagttcactt
tcgtatagcatggtggtatctgaagcagccaaagtaggcactattattggtactgtagca
gcccatgatccagatgcatctaacagtcctgtcaggtattcaatagatcgaaatacagac
ttagaaagatatttcaatattgatgccaacactggggttattaccacagcaaagacattg
gacagagagacaaatgctgttcataatattacagttttagcaatggaaagccaaaaccct
tcacaaattgggaggggatatgtggccatcactatcctggatattaacgacaatgcacct
gagtttgctatggattatgaaacaacagtctgtgaaaattcagaacctggccagatcatt
caaagaatcagtgccattgacagagatgagccacctaatggtcatcagttttccttcagt
ttggtaggagatgcaacaaacaaccacaacttcacattacaagacaacaaagacaataca
gcaactatacttacgagacgaaatggctttcgaaggcaagaacaatccgtttattatttg
ccaatattcattgtagacagtggctcaccttccttgagtagcaccaatacactcacgatt
cgagtctgtgactgcgatgcagatggcattgcccaaacgtgtaatgcagaggcctacatc
ttgccagctggacttagtactggagcactcatagcaatcctggcttgcgtgttgacactg
ctagtgcttgtcttgctgattgtttcaatgaggcgacggaaaaaagagcctcttatttta
gacgaagagagagatatcagggaaaatatagtccgatatgatgatgaaggaggtggagag
gaggataccgaagcatttgatatggctgccctgaggaacctcaacgtcattcgtgatacc
aagatcaggagggatgtgactccagagatccagttcttgagcagaccatcttttaaaagc
atccctgataatgttatttttcgggaatttatttgggaaaggttaaaagaagctgatgtg
gatccctgcgctccaccatatgattccctgcagacatatgcatttgaaggaaacggttca
gtggctgagtcactcagctctttagattcggtcagttcaaactctgatcagaattatgat
tacctcagtgactgggggcctcgtttcaaacggcttgcagatatgtatggaactggacca
gaaaatttgtattcatag
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