Thamnophis sirtalis (common garter snake): 106540089
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Entry
106540089 CDS
T06107
Symbol
PAX3
Name
(RefSeq) paired box protein Pax-3 isoform X1
KO
K09381
paired box protein 3/7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106540089 (PAX3)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106540089 (PAX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
106540089
NCBI-ProteinID:
XP_013910562
UniProt:
A0A6I9X9X2
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MTTLGGAVPRMMRPAPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
YKRENAGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGEEDEGELERKEAEEN
EKKAKHSIDGILSERASAQQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMP
TLPTYQLSESSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSSLPSNPDSSSAYCLPSTR
HGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMEPVPGYQYGQYGQSAFHYLK
PDIA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctgggtggagctgtccccaggatgatgcgaccagctcccggacagaattat
cctcgcagcggttttccgttagaagtgtccactcctctgggccaaggccgagtcaatcag
cttggaggtgtttttatcaatggcaggcccctacccaaccatattcgccacaagatcgtg
gagatggcccatcatggcatccggccatgcgtcatctcccgccagctccgagtgtctcat
ggctgtgtctccaagattctctgcaggtaccaggagacaggctccataaggcccggggcc
attgggggcagcaaacccaagcaggtgacgacgccggatgttgagaagaagatcgaggag
tacaagcgggagaacgcaggcatgtttagctgggagatccgggacaaattgctgaaagac
ggcgtgtgcgacagaaacaccgtgccttcagtgagctccatcagccgcattttgagaagc
aaatttgggaaaggagaagaagacgaaggggagctggagcgtaaggaagcggaagagaac
gagaaaaaggccaaacatagcatcgacggcatcctcagcgaaagagcttcagcacaacaa
tcagatgaaggttctgacattgattctgagccagatttgccactgaagagaaagcaacgg
cgaagcagaaccactttcacagcagaacaattagaagagctggagagagcttttgagagg
actcattatcctgacatttacaccagagaggaacttgcacaaagagctaaactcacagag
gctcgggttcaggtttggtttagcaatcgtcgagccagatggaggaagcaagctggggcc
aatcagttgatggctttcaatcacttgattccaggaggtttcccaccctctgccatgcca
actctgccaacttatcagttatcagaatcttcctatcaacctacttctattccacaagct
gtgtcagacccaagcagtacagttcaccgacctcaacctcttccaccaagcacagtacac
caaagcagcctcccttcaaatccagacagcagctctgcctactgcctaccaagcacaagg
catggcttttccagctatacagacagctttgtgcctccatccgggccctcaaatcctatg
aaccctgccattggcaatggcctttcacctcaggtaatgggcctcttaactaaccatgga
ggagtccctcaccagccccagactgactacgccttgtcaccattaactgggggtttagag
ccaaccaccacagtgtccgcaagttgtagtcaaagactagatcatatgaaaagtttagat
agccttccgacatctcagtcatactgcccaccaacatacagcactactggttacagtatg
gagcctgtcccaggataccagtatgggcaatatggacaaagtgcctttcattatctgaag
ccagatattgcataa
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