Thamnophis sirtalis (common garter snake): 106540141
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Entry
106540141 CDS
T06107
Symbol
GTPBP1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106540141 (GTPBP1)
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106540141 (GTPBP1)
03012 Translation factors [BR:
tsr03012
]
106540141 (GTPBP1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106540141 (GTPBP1)
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106540141 (GTPBP1)
Translation factors [BR:
tsr03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
106540141 (GTPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
106540141
NCBI-ProteinID:
XP_013910651
UniProt:
A0A6I9X8J0
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MATERSRSPVGGSPVPASMFAPEPVAHGGTVAAFSRPHGGVPEADCSEDGELLNGEPELD
LTSKLVMVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTDYGLCDGDMEASYATV
KSMAEQIDADVILLREHQEAGGKVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVL
THGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKI
CEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALN
VPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMC
PIFQISNVTGENLELLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGL
IKLNDTLLLGPDPLGNFLPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV
SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV
HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT
KREESGAQVGVAVLTSPVAEDGAPLATVASAPSGAQQPQPALDEESHNQEGNKAKAGGGG
RRRGGQRHKVKSQAAIVTPAGGC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaaaggagtcgctctccggtggggggctcgccagtgccggcctcgatgttc
gccccagagcccgtggcgcacggcgggacagtggcggctttctctaggcctcacggcggc
gtcccagaagctgactgcagcgaggacggcgagctgctgaacggagagccggagctcgat
cttaccagtaagctagtaatggtgagcccaacatccgaacagtatgatagtttactccga
cagatgtgggagaggatggatgaaggatgtggagagaccatctatgttattggtcaaggg
tcagatgggactgactatgggctttgtgatggagacatggaagcctcctatgccacagtg
aagagcatggcagaacaaatagacgctgatgtaattctcttgcgagagcaccaagaagca
ggaggcaaagtacgtgattatttggtgcggaaacgtgtgggtgacaacgatttcctagag
gtcagggtagcagtggttggcaatgtggatgctgggaagagcactttgctgggggttctt
acccatggtgaactggacaatggacgtggttttgctcggcaaaaactttttcgccacaag
catgagattgagtcaggccgtaccagcagtgtgggcaatgacatcttgggcttcgacagc
gaaggcaatgttgtgaacaagcctgacagccatggtgggagtttggaatggaccaagatt
tgtgagaaatcaaccaaagtcataaccttcattgacctggcggggcacgagaagtactta
aagactacagtgtttggcatgactgggcatctccctgatttttgcatgctaatggttggc
agcaatgctggaattgttggaatgaccaaggagcacctaggtctggcattggcacttaat
gttccagtctttgtagtggtgaccaagattgatatgtgtccggctaacatacttcaagaa
actctgaagctcctgcaacgacttttgaagtccccaggatgcaggaagatccctgtgctg
gtccaaagtaaagatgatgttattgttacagcctccaatttcagctctgaaaggatgtgc
ccaatcttccagatttccaatgttacaggtgagaatttggagttgctgaagatgtttctc
aatctcctatctccaaggacaagttaccgggaggaagaacctgcggaattccagatagat
gatacttattctgtgccaggtgttggaacagtggtgtctgggacaactctgagaggccta
atcaagttaaatgacactttgcttctaggcccagatccgctaggtaacttcttgcctatt
gcagtgaaatccatccatcggaagcggatgccagtcaaagaggtgcggggtggtcagact
gcttcctttgctctgaaaaagattaaacgttcctctatcaggaaaggcatggtgatggta
tcacctcggttgaatccccaagcctcttgggaatttgaagcagagattttggtactccac
catcctaccactatcagtccacgttatcaggcaatggtacattgcggtagcattcgccag
acagccactatccttagcatggacaaagactgcctacgcactggggacaaagccactgtc
cacttccgcttcatcaaaactcctgagtacttgcacatagaccagcggctagtttttcgt
gaggggcgtaccaaagcggtcggcactatcaccaagttactccagaccaccaataattct
cccatgaactcgaagccccagcaaatcaagatgcagtctacaaaaaaaggacccttgacc
aagcgcgaagagagtggagcccaggttggcgtagcagtgctgacttcccctgtggcagag
gatggagccccattggcaacagttgcctcagcaccctctggtgctcaacaaccacagcct
gcattggatgaagaatcccacaatcaagagggaaataaggcaaaggctggtggtggtgga
cggaggcgtggtggccagcgtcataaagtgaaatctcaagcagctattgtgactccagct
ggtggctgctga
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