Thamnophis sirtalis (common garter snake): 106540156
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Entry
106540156 CDS
T06107
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106540156
04090 CD molecules [BR:
tsr04090
]
106540156
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106540156
CD molecules [BR:
tsr04090
]
Proteins
106540156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
Sigma54_AID
Motif
Other DBs
NCBI-GeneID:
106540156
NCBI-ProteinID:
XP_013910667
UniProt:
A0A6I9XA67
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MAREVYLLLLLLFCGRTISERQPLPQMPSETLDFGYVPHKIYNTNAYYEPGTIGILFHIV
HAFICIVQPNYFPQDLIKKLALQKFGKQPGDYQKPENVVLTLQAIYYEIGFIISAALGIL
FVLLLPLIGLCFCLCRCCDNCGGEMHQRQKKNVNCRRKCFSSLLLVTTLLSSIGVFFAYA
ANQHLTNQVRGARGLMYNNFRDLQMFMNGTPGQIDYLVNQYNTTKKKTLSDLNNVETLLG
NRVWEQLGKEVYPALDAALTMAGAIRETKEALENVSGCLEMLQEGTEKLHTSLMDVMEDL
IDTLNDSACMSTQVASTCNLIRNSLNQLTINANYSKLPGVNPQLAKVNEVLKIDLSNLIQ
KGYAAFNDTPQLVRDQTKNILSAVPHIKNILEDVGSNITAFTKKLPIQKILTDFTIYLTQ
SEAYVENYFPLVEQYDFYRWLGCLILCCMVVLILVFFYLGLLCGMCGYDKNATPTTRGCV
SNTGGNFLMAGVTFSFLFSWVLMLIVVVTFIAGGNMEKLICESFDDKTLFQILDTPYLLN
RQWKHYLSGIILKNPNIDLTFEKVYSDCKENKGIYTTLRLENLFNIHKILNISMYAEDVS
LKIKHININLSNIVLLSNTGKENLLNFGSSGINEINFAAYLSEINKSITKIDLLLYANDL
EARADQLPKGALENALKGHANTIRLIHNQQVVPLEQGMKYVRARSTLNQSIRLLQKTSLE
LPEKVRGVISAIEATQLLINNNASFIIVQEAKKYMDTILGYFEQYSTWVKDSITTQVATC
KPIANTIDTAVDIFLCSYVMDSLNAFWFGLGGCCALLIPGIICAVKLAKFYRRMDTEDVY
DEVETMPM
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggctagagaagtttatttattgcttcttttattgttctgtgggagaacaatttctgaa
cggcagcctttgcctcaaatgccttctgaaacactagattttgggtatgttccccacaag
atatacaacaccaacgcttactatgagcccggaacaatagggattttgttccacattgtc
cacgctttcatctgcatagttcagcccaattacttccctcaagaccttatcaaaaagtta
gcactacagaaatttggaaagcaacctggtgattatcaaaagcccgaaaatgttgtattg
actcttcaggcaatttactatgaaattggcttcataatctcagctgccctgggaatccta
tttgtcctgttgcttccactgattggcctctgcttctgcctgtgccgatgttgcgacaat
tgtggtggggaaatgcaccagagacagaaaaagaatgtcaattgtcggaggaagtgcttc
tccagcctcctcttggtaactacattgctaagcagtattggggtgttttttgcttatgcg
gctaaccagcatctcacaaaccaagtccgaggagccaggggactcatgtacaataatttc
agagaccttcagatgttcatgaatggaactcctgggcaaattgattatttggtgaatcag
tataacactaccaagaaaaaaacactttctgatcttaataatgttgagacattgcttggc
aatcgagtctgggaacagctgggaaaggaggtataccctgctcttgatgctgcccttacc
atggcaggagctattagagagacaaaagaggcactggagaatgtgagcggatgtctggaa
atgctacaggagggcactgagaagctgcacaccagcctgatggatgtgatggaagacttg
atagatactcttaatgattcagcttgcatgtctacccaggttgcttcaacttgcaacctt
atcagaaattctttgaatcagctgaccattaatgctaattacagcaagttaccaggagtg
aaccctcagcttgccaaagtaaatgaagtccttaaaatagacctttccaatctcattcaa
aagggttatgcagcatttaatgatactcctcaactcgtacgggatcaaacaaagaatatt
ttatcagctgtacctcatataaaaaatatcctggaagatgttggttcaaacatcacagcc
tttactaaaaagcttcccattcagaagattctaacagatttcacaatatacctcactcag
agtgaagcttatgttgaaaattattttccattagtggagcaatatgatttctacaggtgg
ctgggctgcttaatcctatgctgcatggtggtcctgatcctggtctttttctacctggga
ttattatgtggtatgtgtggctatgacaaaaatgcaacaccgacaaccagaggatgtgtc
tcaaatactggaggaaatttcctgatggctggagttactttcagcttcctcttctcctgg
gttctgatgctgatagtggtggtcactttcattgccggtggaaacatggagaagttgata
tgtgaatcatttgatgacaagactttattccaaattttggacacaccctacttgcttaat
cgccagtggaaacactatttatctggcatcattctgaaaaacccaaatattgacttgaca
tttgaaaaagtttacagtgattgcaaggaaaataaaggcatttataccacacttcgcttg
gaaaatctcttcaatatccataaaatcctaaacatcagcatgtatgcagaagatgtgtca
cttaaaatcaagcatatcaatataaatttaagcaatatagttttactgagcaatactggg
aaagagaacctgttgaattttggttcttctggaataaatgaaatcaactttgcagcatac
ctgtcagagattaacaagagcatcaccaaaattgatttattgttatatgctaatgatttg
gaagcaagagcagatcagctgcccaaaggagcattagaaaacgctttgaaaggacatgca
aatactattcggctgatacataaccagcaagttgttcctttggaacaaggaatgaaatat
gttagagctaggagtactttaaaccagagtattcggctactacagaaaacttcgttagaa
cttccagaaaaagtgagaggtgtaatcagtgccattgaagccactcaacttctcataaac
aacaatgcttcatttataattgtccaggaagctaagaaatacatggatactatcttaggt
tactttgagcagtattcaacgtgggtgaaggattcgattactacacaagtagcaacttgt
aaaccaattgcaaatacgattgataccgctgtcgatatttttctgtgcagctatgtaatg
gattctttgaatgccttctggttcggactaggaggctgctgcgccttgctgatccctggc
attatttgtgcggtcaaattagccaaattctaccgcaggatggataccgaggacgtgtac
gatgaagttgaaactatgcccatg
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