Thamnophis sirtalis (common garter snake): 106540220
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Entry
106540220 CDS
T06107
Name
(RefSeq) transcription factor COE3-like
KO
K09103
early B-cell factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106540220
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106540220
BRITE hierarchy
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
106540220
NCBI-ProteinID:
XP_013910749
UniProt:
A0A6I9X5N9
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All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MGAVFQSGPEPAQYHFFHFVLAMYDRHGQPVEIERTSFIDFVEKDREQNGEKTNNGIHYR
LQLLYSNGLRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCG
NRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHILAVSDN
MFVHNNSKHGRRARRLDPSEAATPCIKAISPSEGWTTGGATVIVIGDNFFDGLQVVFGTM
LVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQR
LQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQDIILKRAADIAEALYSVPRNP
NQLTSLAGNHGHSGMMGVNSFGSQLAINISESTQGSEQGYPRSASSVSPRSYMPSSTPQQ
SNYNTITSSMNGYAGATMTGLGVPGSPSFLNGSTANSPYAIMPSSPPLGASSTPAGVFSF
SPVNMISAVKQKSAFAPVVRPQASPPPNCTSANGTGLQGLSGLIVPPM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtttttcaaagtgggcccgagccagcccaataccactttttccacttcgtg
cttgccatgtatgaccgtcacggacagccagtggagatcgagaggacgtctttcatcgac
tttgtggaaaaggacagagagcagaacggagagaaaaccaacaacggaattcactaccgg
ctgcagctgctgtacagcaacggccttcggaccgagcaagatctctacgtgcggctcatt
gactccatgtccaagcaggccatcatctatgaaggtcaggataagaaccccgagatgtgc
cgcgtgttgttaactcacgagatcatgtgcagccgctgctgtgacaagaaaagttgtgga
aaccgcaacgagaccccttccgacccggtcatcattgacagattttttctcaagttcttc
ctcaaatgcaaccagaactgcttgaagaatgcaggcaatccacgggatatgcgccggttc
caggtggtggtgtcgacgacggtgaatgtcgatggtcacatccttgccgtgtctgacaat
atgtttgtccacaacaattccaagcacggacgccgggcacgacggttggatccttcagaa
gcagccaccccctgcatcaaagccatcagccccagtgaaggctggacgacgggaggggcc
accgtgattgtgatcggggacaatttcttcgatgggcttcaggtggtcttcggtaccatg
ctggtctggagtgagttgatcacgccacatgcaatccgggtccagacgccgccccggcac
atccccggcgtggtggaggtgacgctctcctacaagtcgaagcagttttgcaaaggagca
cctgggcggtttgtctacacagccctgaacgagccaacaatcgattatgggtttcagcgc
ctacagaaggtgattccacgacaccccggagaccccgaacgcttaccaaaggaagtcctg
ctgaaaagagcagccgatctggtggaggctttgtatgggatgccccacaataaccaagac
atcatcttgaaacgggcagccgatatcgccgaagccttgtacagcgtcccacgcaaccct
aaccagctgacgtccctggccgggaaccatgggcactcgggcatgatgggcgtcaactcc
tttgggagccagctggccatcaacatcagcgagtccactcagggctcggaacaaggatac
ccgcgcagcgcaagcagcgtctcgccccggagctacatgcccagctccaccccgcagcag
agtaactacaacaccatcacatctagcatgaacggttacgcaggcgccaccatgactggt
cttggggttccaggctcgcccagtttcctcaacggctccactgccaactccccctatgcc
atcatgccatcgagcccacccctgggggcttcctccacccccgccggtgtcttctccttc
tccccggtcaacatgatctcggccgtcaagcagaaaagcgcctttgcccccgttgtccgg
ccccaggcctccccgccccccaattgcaccagcgccaacgggaccggcctgcaaggcctg
tcggggctgattgtcccacccatgtga
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