Thamnophis sirtalis (common garter snake): 106540273
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Entry
106540273 CDS
T06107
Symbol
MEF2C
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106540273 (MEF2C)
04371 Apelin signaling pathway
106540273 (MEF2C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106540273 (MEF2C)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
106540273 (MEF2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
106540273
NCBI-ProteinID:
XP_013910816
UniProt:
A0A6I9X909
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCAVQPPNFEMPVSIPVSNHNSLVYSNPVSSLGNPNLLPLAHPSLQRN
SMSPGVTHRPPSAGNTGGLMGGDLTTGAGTSAGNGYGNPRNSPGLLVSPGNLNKNMQAKS
PPPMNLGLNNRKPDLRVLIPPGSKNTMPSVSEDVDLLLNQRINNSQSAQSLATPVVSVAT
PTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGFNTASALHLGSVTGWQQQHLHNMPP
SALSQLGACTSTHLSQNTNLSLPSTQSLNIKSEPVSPPRDRTTTPSRYPQHTRHEAGRSP
VDSLSSCSSSYDGSDREDHRNEFHSPIGLTRPSPDERESPSVKRMRLSEGWAT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatcacgaggataatggatgaacgtaataggcaggtgact
tttacgaagaggaaatttgggttaatgaagaaggcttatgagttgagtgttctatgcgac
tgtgaaattgctctcataatattcaacagcaccaataaacttttccagtatgccagcact
gatatggacaaggtgttgctgaagtatacagaatacaatgagccgcatgagagtcgaacg
aattcagatattgtcgagacgttgagaaagaaaggacttaatgggtgtgacagtccagat
cccgatgcagatgattcagtaggtcacagccctgagtctgaggacaagtacaggaaaatt
aatgaagatattgatctaatgatcagcaggcaaagattatgtgctgttcaaccacctaac
tttgagatgccagtttctatcccagtgtccaaccacaacagcttggtatacagcaaccca
gttagttcattgggtaaccccaaccttttgcctctggcccacccttccttacagcggaat
agcatgtctcctggggtgacacatagaccaccaagtgcaggtaacacaggtggcctgatg
ggtggggacctcacaaccggtgcaggcaccagtgcagggaatgggtatggcaaccctagg
aactccccaggtctgctggtctcacctggcaacttgaacaagaatatgcaagcaaaatca
ccaccacccatgaatttgggattgaacaatcgtaaaccagacctccgagtgctgattcca
ccgggaagcaagaacacaatgccatctgtgtctgaggatgttgatctgcttttgaatcaa
aggataaataactctcagtctgctcagtcattggctactccggtggtttccgtggcaact
cctactttaccagggcaagggatgggaggatacccgtcagccatttcaacaacatatggt
accgagtattcgctaagtagtgcagatttgtcatcattgtctggctttaacacagccagt
gctctccacttgggttcagtaactggctggcagcagcaacatctacacaacatgccacca
tctgccctcagtcaattgggagcttgcactagcactcatttatctcagaatacaaatctc
tccctgccttctactcaaagcctcaacatcaagtccgaacctgtttctcctcctagagac
cgtaccaccacgccatcgagatatccacagcacacgcgccacgaggcgggaagatctcct
gttgacagcttgagcagctgtagtagttcctacgatggaagcgacagggaagatcaccga
aatgaattccactctcccattggactcaccagaccttcgccggacgaaagggaaagtccc
tccgtgaagcgcatgcggctctctgaaggatgggcaacatga
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