Thamnophis sirtalis (common garter snake): 106540278
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Entry
106540278 CDS
T06107
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106540278
04082 Neuroactive ligand signaling
106540278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106540278
Ion channels [BR:
tsr04040
]
Ligand-gated channels
GABA-A
106540278
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106540278
NCBI-ProteinID:
XP_013910817
UniProt:
A0A6I9XAJ8
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All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MWAVQLREGAGIFVFPVMVAVVSYAKSVTEPSNMSYVKETVDRLLKGYDIRLRPDFGGSP
VDVGMRIEIASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADYLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGESAVSGVSKIELPQFSIIDYKMISKKVVFATGDYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYTFFGKGPQYQKKTAEKATNERKKVEMNKVQI
DTCGNILLTTLEMRNEVSSSDVLASLNDPRATMYSYDSASIHYRRPPTMKDLNSRSTLDR
HTAHQKGRLRRRAS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagttcagctccgagagggcgcggggatttttgtcttcccggtgatggtagct
gtggtctcctatgcgaagagcgtgaccgagcctagcaacatgtcctacgtgaaagagacg
gtggaccgattgctcaaaggatacgacattcgcttaaggccagattttggaggttctccg
gttgatgttgggatgagaatagagatcgccagtatagacatggtctctgaagtcaacatg
gactatacactaactatgtatttccagcaatcttggagggataaaagattgtcctactct
ggcatacctttgaatctaactttagataatagagtggctgattatctctgggtaccagat
acatactttctgaatgacaagaaatcctttgttcatggagttactgtgaaaaatcgaatg
attcggctacatccagatggaacagttctttatggtttgcggattactaccacagctgcc
tgtatgatggatttacgtagatatcccttggatgaacaaaactgcacactggaaattgaa
agctatggatacacaactgacgatattgaattctactggaatggaggggaatctgctgtt
agcggagttagtaaaattgagctccctcagttctcaattattgattacaaaatgatctca
aaaaaagtagtgtttgcaacaggggattacccccgtctgtccttgagttttcgactgaaa
agaaatattggctatttcattctgcaaacctacatgccttctactctaattacaattctg
tcttgggtatccttctggatcaactatgatgcatctgctgcaagagttgcactaggaatc
accactgtgctgacaatgaccaccattaacactcacctcagggaaacacttcccaaaatc
ccatatgtgaaggcaattgacatctaccttatgggctgctttgtttttgtattccttgct
ttattggaatatgcatttgtcaactacacattctttggcaaaggccctcaatatcagaag
aaaacagcagaaaaagccaccaatgagaggaagaaagtggagatgaataaagttcagatt
gacacctgtgggaatatccttcttactaccttggaaatgagaaatgaagtcagcagctct
gatgtgcttgcaagtttgaatgatccaagagccaccatgtactcttatgacagtgccagc
atccattaccggagaccacctactatgaaagacctcaacagcagaagcaccttggacaga
cacaccgcccaccaaaagggacgactacgaagaagagcatca
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