Thamnophis sirtalis (common garter snake): 106540316
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Entry
106540316 CDS
T06107
Name
(RefSeq) tubulin alpha-4A chain
KO
K07374
tubulin alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04210
Apoptosis
tsr04530
Tight junction
tsr04540
Gap junction
tsr04814
Motor proteins
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106540316
09143 Cell growth and death
04210 Apoptosis
106540316
09144 Cellular community - eukaryotes
04530 Tight junction
106540316
04540 Gap junction
106540316
09142 Cell motility
04814 Motor proteins
106540316
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106540316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106540316
03036 Chromosome and associated proteins [BR:
tsr03036
]
106540316
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106540316
04147 Exosome [BR:
tsr04147
]
106540316
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106540316
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
106540316
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
106540316
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106540316
Exosomal proteins of other body fluids (saliva and urine)
106540316
Exosomal proteins of colorectal cancer cells
106540316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
106540316
NCBI-ProteinID:
XP_013910868
UniProt:
A0A6I9XIW6
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGLDSYEEEEEGEE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtccatgttggccaagcaggcgtgcagatgggcaatacttgc
tgggaactgtattgcctggaacatggaattcagccagatggacagatgccaagtgataag
accattggtggtggagacgactcatttactacttttttctgtgaaactggtgctgggaag
catgtcccccgggctgtctttgtggacttggaacccactgtgattgatgagattcgtact
ggcacttatcgtcagctcttccatccagagcaactaatcaccggaaaggaagatgctgcc
aacaactatgcccgtggacattacaccattggcaaggagatcattgacttggtgttggat
aggattcgcaaactggctgaccaatgtacaggactccaaggatttttggtctttcacagc
tttggaggaggaactggctcaggatttacttccttgctgatggaacgtctctctgttgat
tatggcaagaaatccaaattagaatttgctatttacccagctccacaggtctccacagct
gtggtggagccctacaactcaatcctcaccacacataccacccttgagcactcagattgt
gctttcatggtggacaacgaagccatctatgacatttgccgacgaaaccttgacattgag
cgccccacctacaccaatttgaacaggttgataggccagattgtgtcctccatcactgcc
tctctgcgctttgatggggctctgaatgtagacctgacagagttccagaccaatctagtg
ccctaccctcgtatccatttccctctggctacctatgctccggtcatctctgcagagaag
gcctatcacgagcagctttctgtggctgagatcacaaattcttgctttgagcctgctaac
cagatggtgaagtgtgacccccgccatggcaaatacatggcctgctgccttttgtatcga
ggggatgtggtgcctaaagatgtcaatgctgccattgctgccattaagaccaagcgcagc
atccagtttgtagactggtgtcctacaggctttaaagtgggcatcaattaccagcctccc
actgcagttcctgggggagacctagccaaagttcagcgggcagtgtgcatgctgagcaac
accacagccattgctgaggcctgggcccgcctggatcacaagtttgatctaatgtatgcc
aagcgggccttcgtgcactggtatgttggggaagggatggaagaaggggagttctctgag
gctcgtgaagatatggccgctctagagaaggattatgaagaggtgggccttgattcatat
gaagaggaagaggagggagaagaatag
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