Thamnophis sirtalis (common garter snake): 106540317
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Entry
106540317 CDS
T06107
Symbol
NRP1
Name
(RefSeq) neuropilin-1 isoform X1
KO
K06724
neuropilin 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106540317 (NRP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tsr04090
]
106540317 (NRP1)
CD molecules [BR:
tsr04090
]
Proteins
106540317 (NRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F5_F8_type_C
DUF3481
MAM
CUB
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
106540317
NCBI-ProteinID:
XP_013910869
UniProt:
A0A6I9X5Z7
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MTGMIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFELEPDTNPPGGAFCRYDRLEV
WEGFPEVGPHIGRYCGQNTPGRVLSSTGILSMVFYTDSAIAKEGFSANYTVVHNNVPEDF
QCREPLGMESGEIHSDQITASSQYNPQWSSERSRLNYPENGWTPEVDSTREWIQVDVGVL
RFVSAIGTQGAISKETKKMYFLKTYRVDISSNGEDWISIKDGNNKPLLFMGNINPTEIAY
RSFPKPVLTRFVRIKPVTWETGISLRFEIYGCKITDYPCSGMLGMVSGLITDSQITASNE
LDRNWLPENVRLITSRIGWALPPPVGHTYTKEWLQIDLGEEKTVQGIIVQGGKHRENKVF
MRKFKIEYSYNGSDWKWIMDASKKKAKIFEGNTNYDTPELRIFDPLTTRFIRVYPERATH
AGLGLRLELLGCEVEVPTSVPTSADTSPMDECDDDQANCYSGTGDDFHLTGSTTAAITEK
PVPTDTTVQPAIHYSITEELPAYGFNCGFGYSSQKTICRWEHDAQLDLRWAVLTSKTGPI
QDHTGDGNFIYSQADENQKGKIVRLISPIINLQNYALCMTFWYHMLGPHVGTLRIKLRYQ
IPKEYDRVLWTLSGNQGNCWKEGRVFLHKSVKHYQVMVEGEIGKGNVKGNGGIAVDDINF
DSHITQEECRKSNGAGNEIVEVEPDINQTGCTPVYRENGEPYNDNISRKPGNVLKTLDPI
LITIIAMSALGVLLGAICGVILYCACWHNGMSDRNLSALENYNFELVDGVKLKKDKLNTQ
NTYSEA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgactggtatgatcaaatcaccaggattccctgaaaaatatcccaatagccttgaatgt
acttacattatctttgcaccaaagatgtcagagattatcctggaatttgaaagctttgaa
ctggagccagatacaaaccctccaggaggtgcattctgccgttatgatcgtttggaagtc
tgggaaggtttcccggaagttggccctcacattgggcggtactgtggacaaaatactccc
ggtcgtgtcctctcatcaactggcattctgtctatggttttctataccgacagtgcaata
gcaaaagaaggtttctctgcaaactatactgtggtccacaacaatgttccagaagacttc
cagtgcagggaaccacttggcatggaatctggtgaaattcattctgaccagattactgcc
tcttcccaatataacccccagtggtcatctgaaaggtcccgtttaaattatcctgaaaat
ggatggacacctgaagttgattctactagagaatggatacaggtagacgtaggcgttctc
cgctttgtatctgccattgggactcaaggagccatctccaaagaaactaaaaaaatgtat
ttcctgaaaacataccgagtggatataagttccaatggagaagattggatatccattaaa
gatggaaacaataaacctttgctattcatgggaaacatcaacccaaccgagattgcttat
agatcttttcccaagccagttctgacacgatttgttagaatcaagcctgtaacctgggaa
actggaatatcactgagatttgaaatctatggctgtaaaattactgattatccttgttct
ggcatgctgggtatggtgtctgggctcatcacggactctcagattacagcatcaaatgaa
ttggatcggaattggcttccagaaaatgtccgtcttataacaagtcgtataggatgggca
ctgccacccccagttggtcatacatatacaaaagaatggcttcaaatagaccttggtgaa
gaaaagacagtccagggcataattgtccaaggaggtaaacacagagaaaacaaggtcttc
atgagaaaatttaaaattgaatatagctacaatggatcagactggaaatggattatggat
gccagcaaaaagaaagccaagatttttgaaggcaacaccaactatgatactcctgaactt
cgcatctttgacccattgacaaccagatttatccgtgtttatccagaaagagccacacat
gctggattgggactaaggttggaactgctcggttgtgaagttgaagttcctacttcagtc
ccaacctctgctgataccagtcctatggatgagtgtgatgatgaccaagccaactgctac
agtggaacaggtgatgacttccatttgacagggagtaccacagctgcgattacggaaaaa
ccagtaccaactgatactacagttcagccagccatccattattccattactgaagaactt
ccagcatatggtttcaactgtggatttggctacagttctcaaaagacaatctgtcgctgg
gaacatgatgcccagctggacttgagatgggcagtactcaccagcaaaacagggcccatt
caggaccacacaggagatggcaattttatttattcccaagctgatgaaaaccagaaaggc
aaaattgttcgcctcatcagccctatcatcaacctgcaaaattatgccctttgcatgact
ttctggtatcatatgttgggccctcacgtcggcacactaagaatcaaactgcggtaccag
atccctaaagaatacgatcgggtcttatggacactaagtggaaatcagggaaactgctgg
aaggaaggccgggtttttctccacaaatctgtgaaacattatcaggtaatggtggaagga
gaaattggaaagggaaatgtaaagggaaatggaggaattgcagttgatgatatcaacttt
gacagccacataacacaggaagaatgccgaaaatcaaatggtgcagggaatgaaatagtt
gaagtagagccagatattaatcaaacaggatgtactcctgtttaccgtgaaaatggggaa
ccttataatgacaacatctctcgaaagccaggcaatgttctgaaaacacttgaccctatt
cttatcaccatcatcgctatgagtgccctgggtgtgctgctgggcgccatctgtggggtc
attctgtactgcgcctgttggcacaatgggatgtccgatagaaacttatctgcactggag
aactacaatttcgaacttgtagatggtgtcaaattaaaaaaggataaactgaacacacag
aatacgtattcagaagcatga
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