Thamnophis sirtalis (common garter snake): 106540474
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Entry
106540474 CDS
T06107
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106540474
04030 G protein-coupled receptors [BR:
tsr04030
]
106540474
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106540474
G protein-coupled receptors [BR:
tsr04030
]
Rhodopsin family
Vision
Opsin
106540474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
106540474
NCBI-ProteinID:
XP_013911055
UniProt:
A0A6I9Y2K5
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MMSFGTMMLTEALFGFSLNVLTIIAFWKIKEIQTPGNFLILNLALSDCGICINAFIAAFS
SFLRYWPYGSDGCQIHGFQGFLTALTSINCAVAIAWDRYHQYCSRQKLQWNSVFSMGLFA
WCFAGFWSAMPLLGWGAYDYEPLRTCCTLDYTKGDRNYITFLIPLVLFNFVIPLFIILMS
YQSIDNKFRKTGQLKFNTSLPVKSLVFCWGPYSLLSIYAAVENVALVSPKILMIPALVAK
TSPTMNAFIYALGNENYRGGLWQFLTGEKIEKPKIDDKIN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttttggcaccatgatgctgacggaagctttgtttggattctctctgaatgtg
ctgaccatcattgctttctggaagatcaaagagattcaaacccctggcaactttctgata
ctcaacctggccttgtctgattgtggcatttgcatcaacgctttcatcgctgccttctcc
agcttcttaagatattggccctacggctctgacggctgccaaattcatggctttcaagga
tttttaacggccctaacaagcattaattgtgcagttgcaattgcgtgggaccgatatcat
caatattgctccaggcaaaaattacagtggaattcggtgttctccatggggctgtttgct
tggtgtttcgctggcttttggtccgcaatgccccttttgggatggggggcatatgattat
gagcctctgaggacctgttgcactttggactataccaaaggagacagaaattacatcacg
tttcttattcctctggtgctgttcaattttgtgatcccacttttcatcatattaatgtcc
tatcaatccattgataacaaattcaggaaaacaggacagctgaagtttaatactagtttg
ccagtgaaatctttggtcttttgttggggtccatactcacttttaagtatctatgctgca
gttgaaaatgtggcactcgtctcccccaaaatcttaatgattcctgctcttgttgccaaa
acttcaccgaccatgaatgccttcatttacgccttggggaatgagaattaccgaggagga
ttgtggcagtttctaacaggagaaaaaattgagaaacccaaaattgatgacaaaattaat
taa
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