Thamnophis sirtalis (common garter snake): 106540478
Help
Entry
106540478 CDS
T06107
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106540478
03037 Cilium and associated proteins [BR:
tsr03037
]
106540478
Transporters [BR:
tsr02000
]
Other transporters
Pores ion channels [TC:
1
]
106540478
Cilium and associated proteins [BR:
tsr03037
]
Other cilia and associated proteins
Stereociliary proteins
106540478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
RPC5
Asp_protease_2
gag-asp_proteas
TRAP_beta
Bac_small_YrzI
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
106540478
NCBI-ProteinID:
XP_013911059
UniProt:
A0A6I9X6H2
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MDTGYTQCLINMSIVEQLGICTRPLAHPIQFEQVDRMLIEGTAMRITELSLMGFESFEVF
IVSPDLERNISPFKEMSPSWKKSTTCPKSTWLQRNQQPSQLGPEDVKDFLEHVSFLRINR
GWEFKLRYDEDFVKKHPDVVQRQKMLWMGIQANSSSSTPNYSDDESLSEEELEKLKEQVE
EKKKLISIIRNKPWCMAKRLTVLREAQDFVEKFEGALGKGKGKKLYAYKMMLTKKWVKFR
RDFDNFKTQCIPWEMKIKEVESHFGSSVASYFIFLRWMYGLNLVLFGLIFGLVIIPEILM
GMPYGRIPRKTVPRAEQPTAMDFSVLWDFEGYIKYSAIFYGYYNNQRTIGWLKYRLPMAY
FMVGVIGVYGYSLMVVIRSMARNAHEDTGDGDDENFIFSWKMFTSWDYLIGNPETADNKF
ASITTSFKESIVDEQESNKDENIHLRRFLRILANVLIICCLCGSGYLIYFVVKRSQAFSK
MQNIGWYERNEVEIVMSLLGMFCPPLFETIAALEDYHPRIGLKWQLGRIFALFLGNLYTF
LLALMDDVKEKLTEEGVIRNITYWTVLTFHNSSSRNGSALIPPPMDPADVPRGPCWETTV
GIEFVRLTVSDILVTFVMILVGDFLRACFVRFINYCWCWDLEAGFPSYGEFDISGNVLGL
VFNQGMIWMGSFYAPGLVGINVLRLLISMYFQTWAVMSSNVPHERVFKASKSNNFYMGLL
LLILFLSVLPVAYTIMSLPPSFDCGPFSGKKKMYDVIQETIKYDFPPIAAKVLGYLANPG
LIITAVLLMILAIYYLNAVAEGYKHAHAELKKKMQMVFRFVYISC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggacactggctacacccaatgcttaatcaacatgtctattgtggagcagctaggcata
tgcacaagacccctagcccatcccattcaatttgagcaagtggatagaatgctaattgag
gggacagccatgcgaattaccgaattgtctttgatgggctttgagagctttgaggttttc
atagtcagtccagatcttgaacgaaacatttcccccttcaaggaaatgtctccaagttgg
aaaaagtctacaacctgtccaaagagcacctggcttcaaagaaaccagcagcccagccag
cttggtccagaggatgtgaaggacttcctggaacacgtctctttcctgaggataaaccga
gggtgggaattcaagctccgttacgacgaggattttgtcaagaagcatccagatgtggtg
cagaggcaaaaaatgctttggatgggcatccaagccaattcctcctcatccactccaaac
tattcagatgatgaatctctctctgaagaggaactggaaaagctaaaggaacaggtagaa
gaaaagaaaaagctcatatctatcatacgaaacaaaccctggtgcatggcaaagagatta
actgtgctaagggaggctcaagattttgtagaaaaatttgaaggtgctttgggaaaggga
aaaggaaaaaagttatatgcatataagatgatgttgacaaagaaatgggtcaagtttagg
agagattttgataattttaagacacaatgtataccttgggaaatgaagataaaagaagtt
gaaagtcattttggttcttcagtggcatcttatttcatatttctgcgatggatgtatggc
ctaaacctggttctgtttggcttaatatttggactagttataattccagagattttaatg
ggtatgccatatgggagaatacctagaaaaactgtacccagggctgaacaacccactgct
atggatttctctgttctttgggattttgagggttatattaaatattcagcaattttctat
ggctactacaacaatcaaagaacaattggttggttaaagtacagactaccaatggcatat
ttcatggttggtgtcatcggcgtgtatggctatagcctgatggttgtaataagatcgatg
gcccgaaatgcccatgaagacacaggggatggagatgatgagaacttcatttttagctgg
aaaatgttcaccagctgggactaccttataggcaatccagagacagcagataacaagttt
gcatccatcacaactagcttcaaggagtcaattgtggatgagcaagaaagcaacaaagat
gaaaacatccatctaagaagatttctgaggattctggccaatgtacttataatatgctgc
ttatgtggcagtggctacctcatttactttgttgtgaaacgatcccaggccttttcaaaa
atgcaaaacataggctggtatgaaagaaatgaagttgaaattgttatgtcactacttgga
atgttttgccctccactatttgaaactattgcagccttagaagattatcatcctcgtatt
gggctgaaatggcaactgggacgcatttttgcacttttcctggggaatctatatacattc
ttactggccttaatggatgatgtcaaggaaaagctgactgaagaaggtgtgatcaggaat
atcacatattggactgtcctaaccttccataattcatcttcaaggaatggaagtgctctt
attccacctccaatggatccagctgatgtgcctcgaggaccttgctgggaaacaactgtg
gggatagaatttgtgaggcttacagtatctgatattcttgtgacatttgtaatgatccta
gtgggagattttcttcgcgcttgttttgtcagattcataaactactgctggtgctgggat
ctcgaggctggatttccttcatatggagagtttgatattagtggtaatgtgttaggtttg
gtcttcaatcaaggaatgatctggatgggatccttttatgccccaggacttgtggggatc
aacgtattacgtttattaatctccatgtatttccagacctgggctgttatgagcagcaat
gtcccccatgaacgagtgttcaaagcttctaaatccaataatttttacatgggactcttg
ctgttgattttgttcctaagcgtgttaccagttgcatataccattatgtctctgcctcct
tcctttgactgtggaccattcagtggaaaaaagaaaatgtatgatgtcatccaagagacc
atcaaatatgatttcccacctattgcagccaaagtcttaggttatttggcaaatccagga
ctaattataactgcagtgttgcttatgattcttgccatatattatctgaatgctgtggct
gaaggatacaaacatgcccatgcagagctgaaaaagaaaatgcaaatggtatttagattt
gtttacatttcatgttag
DBGET
integrated database retrieval system
