Thamnophis sirtalis (common garter snake): 106540506
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Entry
106540506 CDS
T06107
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106540506 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106540506 (VCPIP1)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106540506 (VCPIP1)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C64
106540506 (VCPIP1)
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
106540506 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
106540506
NCBI-ProteinID:
XP_013911108
UniProt:
A0A6I9XJN3
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MSQPPQQEQQPVATLVPKKKDRRIFSGTCPDPKCQARLFFPAHGPLSSGSIECTDCGQRH
EQRQLLGVEEVTDPDLVLHNLLRNALLGVSGAGPPRKNTELVKVMGLSNYHCKLLSPILA
RYGMDKQTGKAKLLTEMNQGDVFDCALLGDRAFLIEPEHVDTVGYGKDRSGSLLYLQDTL
EDIKKANNSQECLIPVHVDGDGHCLVHAISRALVGRELFWHALRENLKKHFMENLSRYKA
LFHDFIDAAEWEDIINECDPLFIPPEGVPMGLRNIHIFGLANVLHRPIILLDSLSGMRSS
GDYSATFLPGLIPEEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMKLLP
KAWGVPQDLIKKYIKLEDDGSCVIGGDRSLHDKYLMRLVAAMEEVFMDKHGIHPSLVADV
HQYFYRRTGVIGVQPEDVTAAAKKAVIDNRLHKCLICCALSELHVPPEWLAPGGKLYNLA
KSTHGQLRPDKNYSFPLNSLVCSYNPVKDVLVPDYSLSSLTACNWCHGTLVRRVRSDGSV
VYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESD
QSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNIDSAHARR
ADDMQQGQDLASQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIAEQAPIMQKRKTEK
WKQVQKGPARTVSPGTIPDGSSSAPATPTKTPYSPISTKEKKIRITTNDGRQTMLTLKST
TTFLELQESIAREFNIPPHLQCIRFGFPPKELLPPKEGQENEPVPLLHGDRITIEILKGK
EDNNQASSVHSAHVVKHDDIAVTSRITSKELQEQIDKEMYSLCLLATFMGEDVWSYAKGL
PHLFQQGGVFYNIMKKTMGLADGEHCTFPHLPGKTFVYNATEDRLELCVDAAGHFPVGSD
VEDLVKEALNQVRAEASSRSREASPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGS
GTSSQQLHPKVREAPLGRKQNIGTDFNTNSAKLDPSMYTGDSGNSELIRIAPGVGTMRDS
RQLDPNLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQLATNDFSQRKLEATSSSVKTKSP
QVSLTESFTLSSGSGRLNTEITDSNMSNALAASFSTRSKAQKGNSVEEPEEMDSQDAEIT
NTTEPMDHS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgcctcagcaggagcagcagccagtggcaacgctggtcccgaagaagaag
gaccggcgtatcttctcgggcacttgtcctgaccccaagtgtcaggcgcgcctgtttttt
ccggcgcacgggcctctaagcagcgggagcatcgagtgcacggactgtgggcagcgtcat
gaacagcggcagctgctgggagtggaggaggtgacggatcccgacttggtgctgcacaat
ttgctgcggaacgcactgctaggagtgagtggggcggggccccctagaaagaacaccgag
ctggtgaaagttatgggcctgtcaaactatcactgcaagctgctctcgcctattctggcc
cgctatggcatggataaacagaccggcaaagctaaactcctaactgagatgaaccaagga
gatgtttttgactgtgctctgcttggggaccgtgcctttcttattgagcctgagcatgtc
gacactgtaggatacggcaaagatcgctctggtagcctcctgtacctgcaggacacctta
gaggatattaagaaggctaataatagccaggagtgcctcatcccagtccatgtggatggt
gatggccattgtttagtccatgcaatttcccgagcactggtgggtagggaactcttctgg
catgctttgcgggagaacctcaagaagcactttatggagaatctcagccgctataaagcc
ctttttcatgattttattgatgcggcagaatgggaagacataatcaatgaatgtgacccc
ttatttattcctcctgagggtgtaccgatgggtcttcgaaacatccacatttttggacta
gccaatgttttacatcggcccatcatcctcttggattccttgagtggaatgcgtagttca
ggggactattctgccacattccttcctggattgataccagaagaaaaatgcatggggaaa
gatggcatgctgaacaaaccaatttgtattgcctggagtagttctgggcgtaatcattat
attcctctggttggaataaaaggtgctgctttgcctaaattgcctatgaaattacttcct
aaagcttggggagtgcctcaagaccttattaaaaagtatatcaaattggaagacgatggt
agctgtgtgattggaggagacagaagtttgcatgataaatacttgatgaggctagttgca
gccatggaggaagtttttatggataagcatggcattcatcccagtttagtagctgatgta
catcagtacttctatcggcggactggtgtaataggagttcagcctgaagatgttacagca
gctgctaaaaaggcagttatcgacaaccgacttcacaagtgtctcatttgttgtgctctt
tcagaacttcatgttcctccagaatggctagctccaggagggaagctgtataatcttgca
aagagtacccatggtcagttaaggcctgataaaaattacagtttccctctgaacagtttg
gtatgttcctataatcctgtaaaggatgtactagtaccagactacagtttgagtagtctg
actgcctgtaactggtgtcatggcacattggtgcgtcgtgtgagaagtgatggctctgtt
gtatatttggatggggacagaactaatactagatcaacaggtggcaaatgtggctgtgga
ttcaaacattattgggaaggcaaagaatatgacaatctccctgaagctttccctattact
ttagagtggggtgggagggtggtaagagagacagtctattggttccaatatgaaagtgat
caatctctgaacagcaatgtatatgatgttgcaatgaaactcgttactaagcactttcct
ggagaatttggtagtgagattcttgtccagaaagttgtcaatacaattctgcatcaaaca
gccaaaaagaaccctgatgattacactcctgtaaacattgatagtgctcatgcccgaaga
gccgatgatatgcaacaaggacaagatttggcatctcagcttccaaccaaaattattctt
actggacagaaaacaaaaacattgcacaaagaagaactgaatatgagtaaaactgaaaga
actattcaacaaaacattgcagaacaagcacctataatgcaaaaacgaaaaactgaaaaa
tggaagcaagtacaaaaagggccagctagaactgtgtctcctggtactattcctgatggg
tcatcctctgcacctgctactcccaccaagactccttattctccaatatctacgaaagaa
aagaaaattcgcataacaacaaatgatgggcgacagaccatgctcactttgaaatccact
acaacatttctagaattgcaggaaagcatagctagagaatttaatattcctccacatttg
caatgtattcgctttggctttcctcccaaggagctgctgccacctaaggaagggcaagaa
aatgaacctgttcctctgctacatggagatagaataaccatagagattcttaaagggaag
gaagataataaccaggctagttcagtacattcagctcatgttgtgaagcatgatgatatt
gctgttactagcagaattacttccaaggaacttcaagagcaaatagacaaggaaatgtac
tctttgtgtcttcttgcaacatttatgggggaagatgtttggtcttatgcaaaggggctt
cctcatctgttccagcagggtggtgtattctacaatataatgaagaaaacaatgggtctg
gctgatggtgaacactgtacttttccacacttgcctggcaagacctttgtatacaatgca
acagaagatagattggaactttgtgtggatgctgctggtcatttccctgtaggttctgat
gtggaagacttggttaaagaggccctaaatcaagtacgagcagaggcttcttcaagaagt
agggaagcaagtccttcacatggacttctaaaattaggtagtggtggagtagttaaaaag
aaatcagagcaactccacaatgtaactgcatttcaaggaaaaggccattctctaggcagt
ggaaccagtagccagcagcttcatccaaaagttagggaagctccacttggaagaaagcaa
aacataggtacagatttcaataccaattctgctaaattggacccttccatgtacaccggt
gattctggaaatagtgaacttatacggatagctcctggagtaggaacaatgagagatagt
agacaacttgatcctaatttaattgaggcacagcggaaaaaattgcaggaaatggtttct
tcaattcaagcatcaatggacagacatctgcgagatcaaaatacagagcagttggcaaca
aacgatttttctcaaagaaaattagaggcaacaagttcatcagttaaaacaaagagccct
caagtgagtttaactgaatcatttactttatcaagtggcagtggtcgtttgaatacagaa
ataactgatagtaacatgtcaaatgcattggcagcatcattctccacaagatcaaaagcc
caaaaaggaaattctgttgaagagcctgaagagatggatagccaagatgcagaaattact
aatacaactgagccaatggatcattcatga
DBGET
integrated database retrieval system
