Thamnophis sirtalis (common garter snake): 106540524
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Entry
106540524 CDS
T06107
Symbol
ALCAM
Name
(RefSeq) LOW QUALITY PROTEIN: CD166 antigen
KO
K06547
activated leukocyte cell adhesion molecule
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106540524 (ALCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106540524 (ALCAM)
04090 CD molecules [BR:
tsr04090
]
106540524 (ALCAM)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
ALCAM
106540524 (ALCAM)
CD molecules [BR:
tsr04090
]
Proteins
106540524 (ALCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
I-set
ig
V-set
C1-set
Amnionless
DUF2963
Motif
Other DBs
NCBI-GeneID:
106540524
NCBI-ProteinID:
XP_013911140
UniProt:
A0A6I9Y2S0
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MEMPSAVASCFPCRLQRQTPLFFLLGLLLSALSLRPGLGLYTVNTVYGDTIVLPCHLEVP
NGLLFAKWKYEIANKASESIALRSAKKPSAQYDNVPEYKDRISLSENFTLSINNARIGDE
KKFVCMLVTEDNVFEQATLVKIFKQPSKPEIISQAEFLETEELKLLGECITRDGYPAGNI
TWFKNGAILQYTEEAVVIDEQIDADKASGLYTIKSSLKYKPTKDDTKAQFICTVTYFGPT
GPEIIQSESAVPDIYCKLEQETITTTSENISELEVVHKTXTLYCTANFYLTFFLKGEPEP
IRSSSFHVLTDVRRNATGEYRCSLIDKTLIDSITVTVHYLDLSLTPNGEVIKQIGEALPV
SCTISSSKNATVFWLKDNNRMRSTPSFSSLQYQDAGNYICETTLQEVEGLKKSQILTLIV
QGKPQIKMSKRTSTDGSYKTIACHVEGFPKPAVQWTSSGGVINKTEETKYINGKFISKIK
IAPEDNITLTCIAENLLERAVTSLNVSAISIRESDEPEEKSDDNRENVNDQAKLIVGIVV
GLLLAATVAGVAYWLYMKKSKSASKHVAKDLGNIEENKKLEENNHKLEA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagatgccctccgccgtcgcctcctgctttccttgccggctgcagcggcaaacgccg
cttttcttcctcttggggttgctgctttctgccctttctctgcggccaggacttggatta
tatacagtaaacacagtatatggagataccattgttttgccttgccatttagaagttcct
aatggtcttttgtttgcaaaatggaaatacgaaattgcaaacaaggcttcagagtctatt
gctttgcgatctgcaaaaaaaccaagtgcacaatatgacaatgtgccagaatacaaagac
cgaataagtctttctgaaaattttaccctgtccattaataatgcaagaattggagatgaa
aagaaatttgtatgcatgcttgtaactgaagacaatgtctttgaacaggctacactcgtc
aaaattttcaagcaaccatcaaagcctgaaattataagtcaagcagaatttctagaaaca
gaagagttaaaactgcttggagaatgtattacaagagatggttatcctgcaggaaatata
acatggtttaagaatggagctattctgcagtatactgaagaagctgttgtcatagatgaa
caaatagatgcagataaagccagtggactctataccatcaaatcttccctaaaatataaa
ccaacaaaggatgacacaaaggcacagttcatttgtacagtgacatattttggaccaact
ggaccagagataatacaatcagaatcagcagtccctgacatttactgtaagctagagcaa
gaaacaataacaacaacatctgaaaacataagtgaactagaagttgtacacaaaacatag
acattatattgtactgcaaacttttatttaaccttttttttaaagggagagcctgaacca
attcgaagttccagttttcatgtgttgactgatgtaagaagaaatgcaacaggcgaatac
agatgttctctgattgataaaactttgatagattccataacagttacagtacattatttg
gatttgtcacttactcccaatggagaagttattaaacagattggagaagcattgcctgtg
tcttgtacaatttcttccagtaaaaatgctactgtgttctggctgaaggataataacaga
atgaggtcaactccttctttttcgagtttgcagtaccaagatgccggaaattacatctgt
gaaacaactttacaagaagttgaaggcttaaagaaaagtcaaattctgacattgatagta
caaggaaagcctcagatcaaaatgtcaaagagaaccagcacagatggatcttataaaact
atagcctgtcacgtagaaggatttcccaaacctgcagtacagtggactagcagtggaggt
gtcataaataaaacagaagaaactaaatatatcaatggaaaatttattagcaaaatcaaa
attgctcctgaagacaatattacattaacctgcattgctgaaaatctactagaaagagct
gtcacctctttgaatgtatctgctataagtattcgagaatctgatgaaccagaagaaaaa
agtgatgataatagggaaaatgttaatgatcaggcaaaattaatagtgggaatcgtggtt
ggtcttcttctagcagcaacggtggcaggtgttgcttattggctatacatgaagaaatca
aaatcagcttcaaaacatgtagctaaagatcttggaaatatagaagaaaataaaaagtta
gaagaaaacaatcataaattggaagcttga
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