Thamnophis sirtalis (common garter snake): 106540525
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Entry
106540525 CDS
T06107
Name
(RefSeq) GREB1-like protein isoform X1
KO
K27478
GREB1-like protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106540525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_C
GREB1_N
TAGT
Rcd1
Motif
Other DBs
NCBI-GeneID:
106540525
NCBI-ProteinID:
XP_013911141
UniProt:
A0A6I9X9Z7
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MGNSYAGQLKSTRFEEALHNSIEASLRCNSVVPRPIFSQLYLDPEQPPILPEGNQANVKP
KVEELDKELMHRYTQNGSLDFSTSQTINETEEDEEDEDMSDSSSPPIPYAQKPAPEGSCT
TDGFCQAGKDLRLVSLRMEQIDIPPGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNAL
LGFSGNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYHLIRNAQGVLSKGPLICWK
AALLAECRSRHSSVASHSAKPSSSASPSVTPESGTANGYKPGFTQTEISVFSEAQSSSAV
NLSGIQDLTRNKNIVRPLALPGQLVGNTFATATLTSSGPPKKRHRGWSPGSPALPPGVIV
PVPAIRPLPRAEPLLSVPVPQSMLTGILQPQPIPAGETVIVPENLLINSGIRPVILIGYG
TLPYFYGNVGDIVVSPLLVNSYKIPQLENKDLDLFGLTGNQLLSVENMIILTIQYLVWLG
PDKIPLREEFEQIMLKAMQEFTSREQSLQMNAPSTSLSPAQLPWLAKLIASVSQDMVHVV
VTQNSLAEGISETLRSLTEMKHQQKVPDYVVAICTSKIRGSEFCVIVLGQYQSRALAESM
LTTSEFLKEISYELITGKVSFLASHFKNTSLGDELDKLLEMMQQRRGDNVVIPFSGDVNE
CVSSQEAAAMVSTQALDFDSETFQIYQPQLTVARKLLSQVCAIADSGNQSLDLGHFNKVD
FIVVIPRSEVLVQQTIQRIRQSGVLVDLGLEESGAAYQRAEKYVVQLDNEVQTKFDSFMR
RVKQNPYTLFVLVHDNAHVDLTSAISSSLSHGEPCQGLADRVINCREVLEAFNLLVLQVS
SFPYALQTLQSRINSANEVHWIQFGNMEEITQDEKLYFGLNEYSKSLQWGITSPLLRCDD
IFEKMVNTLLERYPRLHSMVIRCYLLIQQYLEALMALTTMSSLRDHSTPETLSIMDDIIT
APGKDKNGCGHMLVIRIPSVQLAMLAKERLQEARDKLGLQYRFEIILGNPASELMVAKHF
VKRLKAWRGNEEDDWFPHTYQDLEGLPCIVVLTGKDPLGETFPRSLKYCDLRLIDSSYLT
RTALEQEVGLACCYVSKEAVRGPIVALDLSEKEQEKTSIGENDTDELLIDLERPQSNSSA
VTGTSGSIAENGVSSSSATDKSQKLSQSMNFQNVATSSVDEGCAAGESLKQECDSLANQI
ASSTTTKLSSASPSVSQTFRWPNQPVKNCKTMHICLPRIVILSKAAYCFLGSQKSGQTPF
SSALLPHADMSWVSSLRPLLHKDMTSEEQSLYYRQWTAARQHHADYSNHGETTSSRSFHP
RRLLLTGPPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEDININHVEENEIAQAGSDQW
PDVEIVSKMNFDLSVHDPKYVLMSPVYTEQLQKIKQEPNREVKVEEFRKRNTVSMMLTKY
AAYNTFHHCEQCHQYMDTNPSPSMSDSTLHAFTFSSSMLGEEIQLHFIIPKSKENYFVFS
KQGRHLESMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLYHAMEGISHLHLLVVKEYE
MPLYRKYWPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGVKRQCVWPF
IVVMDDSCVLWNSHVVQEQSSSQCIDQGSTSKNVSLKSVLQHIEATPKIVHYAILGIQKW
KSKLNSRALKVPFSRCHIHDFILLNIDLTQNVQYDLNRYFCEDVDFNLRTNSSGLLICCF
NNFSLMKKYIQVGGQKDFDIKPKIMVSESLTPLIPLQYVCAPDSEHTLLAAPAQFLLEKF
LQYATYKLFPKAIYNFKNPVLAVDCYLNIGPQVALCYVSSRPHSVNVNCEGVFFSGLLLY
LCDSFVGPDFLKRFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSD
DKPLYFLTGRHV
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcttatgcagggcaattaaaatctacccgttttgaagaagctcttcataac
tccatagaggcctccctcagatgtaatagtgtggttcctcggcccatcttctcccagctc
tatcttgatcctgagcaacctcctattttgccggaaggtaaccaagcaaatgtgaaacca
aaagtggaagagctagacaaagaattgatgcatcgttacactcagaatggaagtttggat
ttttccaccagccagactattaatgaaacagaagaagatgaggaggatgaagacatgtct
gattccagtagtccaccaatcccatatgcacagaaacctgccccagaaggatcttgcact
actgatggtttttgtcaagccggcaaagatttgcgattagtatcgctgcgtatggaacag
attgatattccaccaggcttcctgttggttggagctaagtctccaaatcttcctgagcat
attctagtctgtgctgttgataaaagatttctgccagatgaccatggaaaaaatgcactt
ttaggtttttctggaaattgtataggctgtggagaaagaggatttcggtatttcactgaa
ttttcaaaccacattaatttgaaactcaccactcagccaaagaagcagaagcacttaaag
taccacctaataagaaatgctcaaggtgtgctgtcaaagggacctcttatatgttggaaa
gctgctttacttgcagaatgtagaagcaggcactcttctgttgctagtcattctgctaaa
cctagttcttcagcatctccatctgtgactcctgagagtggaacagccaatggatacaag
ccagggttcacccagacagagatctcggtattcagtgaagcacagtcttcctctgctgtt
aatttaagtggaattcaagatttgactcggaataagaacatagtgagaccacttgctttg
cctggacaacttgtaggaaacacatttgcaacagctaccctgacaagttctggcccaccc
aagaaacgacaccgaggatggtctcctggatccccagcccttcctcctggtgtaattgtg
cctgttcctgctatccggcctcttccaagagcagagcctcttttatctgtcccagttccg
caatcaatgttaactggaattttacagcctcaacccatccctgcaggggagactgtaata
gttcctgaaaatctgctgattaactctggaatcagaccagtgattctaataggttatggc
actttaccttatttctatgggaatgttggagacattgtagtaagtccattgctagtgaat
tcctacaagattcctcagctggaaaataaagatttggatctttttggtttaactgggaat
cagttactaagtgtggagaacatgattattttaacaatacagtatcttgtctggctaggt
cctgataagatacctctcagggaagaatttgaacagatcatgctgaaagctatgcaggaa
tttacttcaagggaacaatccttacaaatgaatgcgccgagcacctccttgtcgccagct
caacttccatggcttgctaagttaattgctagcgtttcccaagacatggtacatgtggtg
gttactcagaattccttggcagaaggcatttctgaaacactgcggtcactgactgaaatg
aagcaccaacagaaggtgcccgattatgtggttgctatctgcacctcgaagatcagagga
agtgagttctgtgtgatagttttaggtcaataccagtctagagctctggcagagagcatg
cttaccaccagtgagtttttaaaggagataagttacgagctcattacaggaaaagttagt
tttctggcatcacatttcaaaaacacatctttaggtgacgagttggacaagttattagag
atgatgcaacagagacggggagataacgtcgttattccgttcagtggagatgttaatgaa
tgtgtatcatctcaagaagcagctgccatggtttccactcaagcactggactttgattct
gaaactttccagatttatcaaccacaactcacagttgccagaaagctcttgtcacaagtg
tgtgccatagcagatagtggcaaccaaagtctggatctgggccacttcaacaaagtagat
tttattgttgtcattcctcgttcagaggtcctcgttcaacaaaccatccagcggattcga
caatcaggtgttcttgtagatttagggcttgaagaaagtggagcagcttaccaaagagca
gaaaaatatgttgtgcagcttgacaatgaggtccaaaccaaatttgatagcttcatgaga
cgagtaaaacagaacccatatactctttttgtgcttgtgcatgacaatgctcatgtggat
ctaacaagtgctatctcaagctctctgtctcatggagagccttgtcaaggacttgctgat
agagtgataaactgcagagaagtccttgaagctttcaatctccttgtcctccaagtgagt
tctttcccatatgctcttcagactctccaatcccgaatcaactcagcgaacgaggtgcac
tggatacagtttggcaatatggaggaaataacccaagatgagaaattgtactttggcttg
aatgaatacagcaagtctctgcagtggggaatcacaagccctcttctgagatgtgatgac
atttttgaaaaaatggtgaatacactcttagagaggtatcccaggctgcacagtatggtg
attcgttgctacctcctcattcagcagtatttggaagccttgatggctctcactaccatg
tcctcactaagagaccacagcacaccagaaacgctcagcataatggatgatatcatcact
gctcctggcaaggataagaatggctgcggccacatgttagtgatccgaattccttctgtg
caactggcaatgctggcaaaagagaggctgcaagaagcacgagataaactaggtctacag
tatcgttttgagatcattttggggaacccagcttcagagcttatggttgccaagcacttt
gtgaaaagattaaaggcatggagaggaaatgaagaagatgattggtttcctcatacgtac
caagatttagaaggtctaccttgcattgttgttttaaccggcaaggatccattaggagaa
acatttcccaggtctttgaaatactgtgatcttcgactgattgattcaagctatttaact
cgcacagccttagaacaagaagtaggcctagcatgctgctatgtttccaaggaggcagtt
cgaggacctattgtagctcttgaccttagtgaaaaggagcaagagaagaccagcattggt
gagaatgatactgatgagctgttgattgacttggagaggccacaaagtaacagcagtgct
gtgactggaacttcaggatctatagcagaaaatggagtgagctcctccagtgcaacagac
aagtctcaaaaactgtcacagtctatgaacttccagaatgttgccactagctctgttgat
gaaggctgtgctgctggggagtctttgaaacaagaatgtgactctctagccaaccagata
gccagcagcaccacgactaaattgtcatcagcttccccttcggtcagccagaccttccga
tggcctaaccagccagtgaaaaattgcaagacaatgcacatatgcttaccccgaattgtg
attttgtcaaaagctgcctattgtttccttggctcacagaaaagtggccagacacctttc
tcttctgctttgttacctcatgctgacatgtcttgggtgagctcgctgaggcctttgctt
cacaaggatatgaccagtgaagagcagtctctttactatcgacagtggactgctgcacgg
caacaccatgcagactacagcaaccatggtgaaactactagcagcaggagttttcatcca
cgacggctacttcttacagggccacctcaggttgggaaaactggctcttatctgcaattc
ctacgaattctctttcgaatgctgatcagattgctggaggtagacgtatatgatgaggaa
gatattaatatcaatcacgtggaagaaaatgaaattgcccaggctggcagtgatcagtgg
cctgacgttgaaattgtcagtaaaatgaattttgatctcagtgtgcatgatcccaaatat
gttcttatgagtccagtctacacagagcaactgcaaaaaataaagcaggaacccaacaga
gaagtcaaagttgaagaattcagaaagcgtaatactgtttctatgatgctgacgaagtac
gcagcttacaatactttccaccactgtgaacagtgccatcaatatatggacacaaatcct
tcaccttcgatgtctgattctaccctacatgcctttacattctcatcctcaatgttagga
gaagagattcagctacattttatcattcctaaatccaaagaaaactattttgtcttcagt
aaacagggcagacatttggaaagcatgcgtcttcctcttgtgtctgataagaatttgaat
gcagtaaagagtcctatttttacaccttcaagtggacgtcatgaacatggtctcttgaat
ctttatcatgccatggaaggcatcagccacctccatcttcttgtggtcaaggaatatgaa
atgccactttaccgcaaatattggcccaaccatatcatgctggttctacctggcatgttc
aacaatgcaggagttggtgctgcgagattcctaattaaagagctttcttatcataacctg
gaactggaaagaaatcgtttggaggaactgggagttaaacgtcagtgtgtttggccattt
attgttgtaatggatgattcttgtgtcttatggaacagtcatgttgtccaagaacaatct
agtagtcagtgtatagatcaaggatcaaccagtaaaaacgtatctctaaagagtgttcta
cagcatattgaagccacacccaaaattgtccattatgcaatattgggaatccaaaaatgg
aagagcaaattgaattctagagcactcaaagttcccttttccagatgccacatacatgat
tttatactgctcaacatagacctgacccaaaatgtgcaatatgatctgaacaggtatttc
tgtgaagatgtagattttaatctgagaacaaacagcagtggcctgcttatctgttgtttt
aacaacttcagtcttatgaaaaaatatatccaggttggcggtcaaaaggattttgatatt
aaaccgaaaatcatggtctcagaaagtttgactccactaatacctcttcagtatgtttgt
gctccagacagcgagcataccctcttggcagctccagctcaattccttttagagaagttc
cttcaatatgccacttacaagcttttcccaaaggccatctacaattttaaaaacccagtc
ttagctgttgattgctatttaaatattgggccgcaggtagctctttgctatgtaagttca
cgtccacattcggttaatgtcaactgtgaaggggtgtttttcagtggtcttcttctctac
ctttgtgactcctttgttggaccagactttcttaaaaggttcaaattcctgaaaggtgca
acactgtgtgtgatatgccaagacaggagctccttgcgtcaaaccattgtgcgattagag
ctggaagatgagtggcagttccgtctgagagatgaattccaaacggctaacagctctgat
gacaagccgctctattttctgactgggcgccatgtgtaa
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