Thamnophis sirtalis (common garter snake): 106540578
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Entry
106540578 CDS
T06107
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106540578 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106540578 (MYO5A)
04131 Membrane trafficking [BR:
tsr04131
]
106540578 (MYO5A)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106540578 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106540578 (MYO5A)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106540578 (MYO5A)
mRNA cycle factors
P-body specific factors
106540578 (MYO5A)
Membrane trafficking [BR:
tsr04131
]
Others
Actin-binding proteins
Myosins
106540578 (MYO5A)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106540578 (MYO5A)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106540578 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIL
IQ
Csm1_N
HTH_17
Motif
Other DBs
NCBI-GeneID:
106540578
NCBI-ProteinID:
XP_013911227
UniProt:
A0A6I9XBL0
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MGPSAVAHKLIRAFLDKTISSSSLCKHLVTSNPGLDKDKYQFGKTKIFFRAGQVAYLEKI
RADKLRAACIRIQKTIRGWLMRKKYLRMRKAAITIQKYVRGYQARCLAMFLRRTKAAIVI
QKFQRMDAARKQYRRIRAATITLQSHSRGYIARKKYHKMLWEHKATIIQKHVRGWLARLR
YHRTLKAIIYLQCCLRRMRAKRELKKLKIEARSVEHYKKLNVGMENKIMQLQRKIDDQTR
DSRSLVEKLTSLEATYTSETEKLRNDVERLRMSEEEAKNATNRLISLQEEIGRLRKELDQ
IQTENKTIKEKADLYKQETDKLVLELKEQNTLLKEEKDDLNSRIQNQAKEITEVMEKKHL
EETKQLDLDLNNERQRYQNLLQEFSRLEERYDDLKDEMRLMEVSGPDAKFSIRLGFGKRC
FPRAPEKWECRVSADAPMLLPRLVLCVVGLFPCKPLFPMCFHLFPHDNKKYADLPLLPVE
LSDLPPFPICPVNQEPSEKKAPLDMSLFLKLQKRVKELELEKQSLQDELEKKEDQVLRAK
AKEEERPQMRGAELEYESLKRQELESENKKLKNELNELRKALMEKSAPDVTMPGAPAYRV
LLDQMTSVSEELEVRKEEVLILRSQLMSQKEAVPYKNTMTDSTILLEDVQKLKDKGEIAQ
AYIGLKETNRLLESQLQTQKRSHENDLEALRGEIQSLKEENNRQQQLLAQNLQLPPEARI
EASLQHEITRLTNENLDLMEQMEKQDKTVRKLKKQLKVFAKKIDELEVGQMENISPGQII
DEPIHPVNIPRKEKDFQGMLEYKKEDEPKLVKNLILDLKPRGVAVNLIPGLPAYILFMCV
RHADHLNDDQKMRSLLTSTINGIKKNLKKRGDDFEMVSFWLSNTCRFLHCLKQYSGEEGF
MKHNTSRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQG
VSGVKPTGLRKRTSSIADEGTYTLDSIIRQLNTFHSIMCQHGMDPELIKQVVKQMFYIIG
AVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQAAQLLQVK
KKTDEDAGAICSMCHALTTAQVTLFRDKNTNVIPFFSLQLRMRDKKDSPQLLMDAKHIFP
VTFPFNPSSLALETIQIPASLGLGFITRV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggccctagtgcagttgcccacaaacttataagagccttcctggataaaaccattagt
tcatccagtctatgtaaacacttagtaacctctaatcctggccttgacaaggataagtac
cagtttgggaagacaaaaatatttttccgggctggtcaagtagcttatttggaaaaaata
agggccgataaactgagagcagcttgcatccgtatccaaaagactatcagggggtggctg
atgaggaagaagtacctgcgcatgaggaaagcagccatcaccattcagaaatatgtccgt
ggataccaggcacgatgccttgcaatgttcttacgaagaaccaaagctgccattgtcatc
cagaaattccagcgcatggatgctgcacgaaaacagtatcggcgcatccgagcagctacc
attactctccagtcgcactcgcgaggttacattgccaggaagaagtatcacaagatgctt
tgggagcacaaggccaccattatccaaaaacatgtgcgcggctggctggctcgcttgcgc
tatcaccggactttgaaggcaattatttacctgcaatgctgcctccggcgcatgagggcc
aagagggagctgaagaagctgaagatagaagctcgctcagtggagcactacaagaaactc
aacgtcggcatggagaacaagattatgcaactccagcgtaaaatcgacgaccagacacga
gactccaggtccctggtggagaagctaactagcttagaggcaacttacacttccgagaca
gagaagctgcggaatgacgtagagaggcttcggatgagtgaagaagaggccaagaatgcc
accaatcgcctcattagccttcaagaggagatcgggaggctgcggaaagagctggatcag
atccagacggagaacaaaaccatcaaagaaaaggcggatctctacaaacaagaaacagac
aagctggtgcttgaactaaaagagcaaaacacccttctcaaagaggagaaagatgacctg
aatagccgcatccaaaaccaggccaaagaaattacagaggtcatggagaaaaagcatctg
gaggagacaaagcaactggacctagacctgaacaacgaaaggcagaggtatcagaatctg
ctccaagaattcagccggctagaagagcgatatgatgacctgaaagatgagatgaggctg
atggaggtgagtggaccagatgccaaattcagtatcagacttgggtttgggaagagatgc
tttccaagagctccagagaaatgggaatgtagagtctcagctgatgctccaatgttgctg
ccacgtttggtcctctgcgttgtgggcctgtttccctgcaagcccttatttcccatgtgc
tttcatctttttcctcacgataacaaaaagtatgcagatctgcccctccttccagtagaa
ctttctgatctaccacccttccccatttgccctgtcaatcaggaaccaagcgagaaaaag
gcacctttggacatgtctctcttcctcaaactacaaaaacgagtgaaggagctggagctg
gaaaaacagtccctgcaggacgagctagagaagaaagaagaccaagttctgcgagccaag
gccaaggaggaagaaaggcctcagatgagaggagcagagctggaatacgaatcgcttaag
cgccaagagctggagtcggagaataagaaactaaagaacgaattgaacgagttgaggaag
gccttgatggaaaagagtgctccagatgtcacgatgcctggcgccccagcatacagggtc
cttttggaccagatgacctccgtcagtgaagagctggaggtccgcaaggaggaagttctc
atcctgaggtctcagctgatgagccagaaggaggcagtgccgtacaagaacaccatgaca
gactctacaattcttctggaagatgttcaaaagttgaaggacaaaggagagatcgctcag
gcttatattggactgaaggaaacaaacaggcttctggaatctcagctgcaaactcagaag
agaagccacgagaacgatctggaggccctccgtggagagatccagagtctgaaggaggag
aataaccgccagcagcagttgctggcccagaacctccagctgcccccggaagcccggata
gaggccagtctgcagcatgaaatcacccgtctgaccaatgaaaacctggatttaatggag
cagatggagaaacaggacaagacggtccggaaactgaagaagcagctgaaagttttcgcc
aagaaaattgatgagcttgaagtgggccagatggagaacatttcacctgggcagatcatt
gacgagcccatacatcccgtgaatatcccaaggaaagaaaaagacttccaaggaatgtta
gaatacaagaaagaggatgaaccgaagctcgttaagaatctcatcttagacctgaagcct
cgtggagtggcagtaaatctcatcccagggcttccagcttacattttgttcatgtgtgtc
cggcatgctgaccaccttaacgatgatcaaaaaatgaggtccttgctgacttctacaatt
aacggcatcaaaaaaaatctgaagaaaagaggtgacgacttcgaaatggtctccttctgg
ctgtcgaacacatgccggtttttgcactgtctgaagcagtatagcggtgaagaagggttt
atgaaacataacacatctcgtcagaacgaacactgcctaactaattttgaccttgccgag
tacagacaagtattaagcgacctggccatccaaatttatcagcaacttgttcgagttcta
gagaatattttgcagcccatgattgtttcaggaatgctggagcacgaaaccatccaagga
gtgtccggggtgaagcccaccggcctgcgtaagaggacctctagcatcgccgacgaaggg
acctacaccttggattccatcatccgtcagctgaacacgttccactccatcatgtgccag
catggcatggatcctgagctgatcaagcaggtggtcaaacagatgttctacatcattggg
gccgtgaccctcaataacctgctgctgcgaaaggacatgtgctcttggagcaaaggaatg
cagatcaggtacaacgtaagccagctggaagaatggcttcgcgacaaaaacctgatgacc
agcggtgccaaggagacccttgagcccttgatccaggctgcccagctgctacaagtgaaa
aagaagaccgacgaggacgcaggggccatctgctccatgtgccacgcattgactactgca
caggtaaccctcttccgggacaagaacactaacgtgattccgttcttctctttgcagctg
cgaatgcgggacaagaaggattctcctcaactcctaatggatgctaagcatattttcccc
gtcactttcccattcaacccttcctctcttgcgttagaaactatccagatcccagctagt
ttgggtctagggttcatcactcgcgtctga
DBGET
integrated database retrieval system
