Thamnophis sirtalis (common garter snake): 106540593
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Entry
106540593 CDS
T06107
Name
(RefSeq) uncharacterized protein LOC106540593
KO
K05508
C-X3-C motif chemokine 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04060
Cytokine-cytokine receptor interaction
tsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106540593
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106540593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106540593
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Chemokines
106540593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
106540593
NCBI-ProteinID:
XP_013911243
UniProt:
A0A6I9XK25
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRNLLALLALTVACEWPIPAVAGEPDTTKACKMECLDHLRRKYPLSILESYTVSTCRGKT
SIILKTKKNRFFCAKRDDDWVKKAMQAMDVRTKFGHTIKSLPVANRHSGETKLEVEGHAQ
PTKKISTTPYKTATLPVRTTGEAQPSVERGLSGMEATTSFALLIPQPETIADKSTLQPDS
IANHEIGTETLEGHKGLGEHILSTKKGLEDFSGTTPQLVSPPMPFPGSDRTSTQSPAFVS
ETLANPSTRPSMNSPISKLLQKSVTKDKMLIMIPTKVSNSSDQHRLLFSSSSADHELQSA
KGSTTQLPANSSSPSSRQSSSGRTSLSSVQFRGVVDAEREGGTTELPLSIGTGRTFPKPS
DPLQIPGHRQETFIESTSIPNPNTPPGTVVCNPRSQTMVQNYIIPVLSIGVVLCVLLVVG
GLVYFKRNLCIKRSPKRQVQGVMYYACDSQMESHSMELV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacctgctggcgctgctggcgctgacggtcgcttgcgagtggcccatcccggcg
gtggcaggagaacctgatacaactaaagcttgtaaaatggaatgcctcgaccatttacgg
aggaaatatcctttgagtatactagagagctacacagttagcacctgcagaggcaagacg
tcaatcatattgaaaacgaagaaaaacagatttttttgtgccaagagagacgatgactgg
gtaaagaaagctatgcaggccatggatgtaaggactaaattcggccacaccataaaaagt
ctccctgtagctaacagacattcaggagaaactaagttggaggttgagggccacgctcaa
cccacgaaaaaaattagcacaaccccctacaagacagctacactccccgtgagaaccaca
ggagaggcacaaccttctgtggaaagagggttgtctgggatggaggccaccacatctttt
gcattgttgattcctcaaccagaaactattgctgataaatccacccttcagcctgactcg
attgcaaatcacgagatagggacagaaacccttgaggggcacaaaggattgggggagcac
atcctgtcaacgaagaaaggcctggaagatttctctggaacaaccccacaattggtgtca
cctcctatgccttttccaggatctgacagaacaagtacccaaagtcctgcgttcgtttcc
gaaactcttgcgaatccttcaacccgtccttccatgaactctcccatcagcaagcttctc
cagaagtctgtcacaaaagataagatgttgattatgatacccaccaaggtttccaactct
tccgatcaacatcgtttgcttttcagcagctccagcgcagaccatgaattgcagtcagct
aagggttccacaactcaacttcctgccaactctagtagtccttcaagcagacagtccagc
tctggtagaaccagcctcagttctgtccagtttcgaggtgtggttgatgcagaacgggaa
ggaggcaccacagaattgcctttatctattggaactggtagaactttccccaaaccatca
gaccctctccaaattccaggtcatcggcaagaaacttttattgagagtacttcaataccc
aacccaaataccccaccaggaactgtagtttgcaatccccgttcccaaaccatggtacaa
aattacattatccccgtgctttctattggggttgttctctgtgtcctcttggtagttggt
ggcttagtctactttaagcgtaacctgtgtatcaaacggtcacccaagaggcaggttcaa
ggcgtgatgtactacgcatgtgactctcagatggagtcacattccatggaacttgtgtga
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